RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 GHITMQ9H3K2 345 aa12.93□□□□□ -0.34
SSBP1-214ENST00000498107 ELF5Q9UKW6 265 aaPredicted RBP12.93□□□□□ -0.34
SSBP1-214ENST00000498107 A0A1W2PPE3 182 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 H3BUX3 64 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 TXNL1O43396 289 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 IGHV4-59P01825 116 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 PRSS3P35030 304 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 CEACAM6P40199 344 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 RPL15P61313 204 aaKnown RBP12.92□□□□□ -0.34
SSBP1-214ENST00000498107 GNMTQ14749 295 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 LDLRAD2Q5SZI1 272 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 UTF1Q5T230 341 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 LIAT1Q6ZQX7 453 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 OR8H3Q8N146 312 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 OR10J5Q8NHC4 309 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 DGCR14Q96DF8 476 aaKnown RBP12.92□□□□□ -0.34
SSBP1-214ENST00000498107 CABLES2Q9BTV7 478 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 RABL2AQ9UBK7 228 aaPredicted RBP12.92□□□□□ -0.34
SSBP1-214ENST00000498107 PITPNC1Q9UKF7 332 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 VPREB3Q9UKI3 123 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 RABL2BQ9UNT1 228 aa12.92□□□□□ -0.34
SSBP1-214ENST00000498107 MRPS7Q9Y2R9 242 aaKnown RBP12.92□□□□□ -0.34
SSBP1-214ENST00000498107 SSX5O60225 188 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 GAPDHP04406 335 aaKnown RBP12.91□□□□□ -0.34
SSBP1-214ENST00000498107 GSTT2P0CG29 244 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 GSTT2BP0CG30 244 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 CT45A1Q5HYN5 189 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 DYNAPQ8N1N2 210 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 CT45A3Q8NHU0 189 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 MAFIPQ8WZ33 124 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 DUX5Q96PT3 197 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 C6orf62Q9GZU0 229 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-214ENST00000498107 SCPEP1Q9HB40 452 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 RAB18Q9NP72 206 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 TNFRSF19Q9NS68 423 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 EXTL2Q9UBQ6 330 aa12.91□□□□□ -0.34
SSBP1-214ENST00000498107 CUBNO60494 3623 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 TRBV6-7A0A0A0MS04 114 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 HSD17B6O14756 317 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 BET1O15155 118 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 CRYBA1P05813 215 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 ZNF134P52741 427 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 ZNF137PP52743 207 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 ZNF816Q0VGE8 651 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-214ENST00000498107 PLA1AQ53H76 456 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 FAM53AQ6NSI3 398 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-214ENST00000498107 CNIH2Q6PI25 160 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 C5orf24Q7Z6I8 188 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 HOGA1Q86XE5 327 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 LYG1Q8N1E2 194 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 BEST4Q8NFU0 473 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 MCFD2Q8NI22 146 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 CHIAQ9BZP6 476 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
SSBP1-214ENST00000498107 TOLLIPQ9H0E2 274 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 IFT46Q9NQC8 304 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 PIPOXQ9P0Z9 390 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 OR1A1Q9P1Q5 309 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 ANXA10Q9UJ72 324 aa12.9□□□□□ -0.34
SSBP1-214ENST00000498107 IGKV1-6A0A0C4DH72 117 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 SULT1C2O00338 296 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 CTDSP2O14595 271 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 RAB29O14966 203 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 SLC31A2O15432 143 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 HLA-DQB1P01920 261 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 ARPC4P59998 168 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 HERPUD1Q15011 391 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 IGSF11Q5DX21 431 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 FAM71F2Q6NXP2 309 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 TGIF2LXQ8IUE1 241 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 DTX3Q8N9I9 347 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 S1PR3Q99500 378 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 DCUN1D5Q9BTE7 237 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 NXF2Q9GZY0 626 aaKnown RBP12.89□□□□□ -0.35
SSBP1-214ENST00000498107 MMP27Q9H306 513 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 RDH8Q9NYR8 311 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 TCF19Q9Y242 345 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 A3GALT2U3KPV4 340 aa12.89□□□□□ -0.35
SSBP1-214ENST00000498107 DPPA5A6NC42 116 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 RNF212BA8MTL3 300 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 LANCL1O43813 399 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 PAX6P26367 422 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 SRSF2Q01130 221 aaKnown RBP12.88□□□□□ -0.35
SSBP1-214ENST00000498107 THNSL2Q86YJ6 484 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 SNX29P2Q8IUI4 249 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 LAX1Q8IWV1 398 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 ST6GALNAC6Q969X2 333 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 DIRAS2Q96HU8 199 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
SSBP1-214ENST00000498107 DNHD1Q96M86 4753 aa12.88□□□□□ -0.35
SSBP1-214ENST00000498107 IGKV1D-8A0A087WSZ0 117 aa12.87□□□□□ -0.35
SSBP1-214ENST00000498107 IGHV1-3A0A0C4DH29 117 aa12.87□□□□□ -0.35
SSBP1-214ENST00000498107 FAM181BA6NEQ2 426 aa12.87□□□□□ -0.35
SSBP1-214ENST00000498107 ST8SIA5O15466 376 aa12.87□□□□□ -0.35
SSBP1-214ENST00000498107 GPR137BO60478 399 aa12.87□□□□□ -0.35
SSBP1-214ENST00000498107 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
SSBP1-214ENST00000498107 PTHLHP12272 177 aa12.87□□□□□ -0.35
SSBP1-214ENST00000498107 S100A5P33763 92 aa12.87□□□□□ -0.35
SSBP1-214ENST00000498107 ACTG1P63261 375 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms