RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 IGHV7-81A0A0B4J1V7 117 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 NBR2O15453 112 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 IGLV1-40P01703 118 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 INSL3P51460 131 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 HTD2P86397 168 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 ZNF616Q08AN1 781 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 ST3GAL4Q11206 333 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 TTC23Q5W5X9 447 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 NKAIN3Q8N8D7 197 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 SETD9Q8NE22 299 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 OR1N2Q8NGR9 330 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 CYGBQ8WWM9 190 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 GGHQ92820 318 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 RITA1Q96K30 269 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 ANKRD60Q9BZ19 345 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 PARP11Q9NR21 331 aa17.17■□□□□ 0.34
HDDC3-203ENST00000494993 HUWE1Q7Z6Z7 4374 aaKnown RBP17.17■□□□□ 0.34
HDDC3-203ENST00000494993 YPEL1O60688 119 aa17.16■□□□□ 0.34
HDDC3-203ENST00000494993 LY6G6FQ5SQ64 297 aa17.16■□□□□ 0.34
HDDC3-203ENST00000494993 ZNF833PQ6ZTB9 187 aa17.16■□□□□ 0.34
HDDC3-203ENST00000494993 YPEL2Q96QA6 119 aa17.16■□□□□ 0.34
HDDC3-203ENST00000494993 OR5B12Q96R08 314 aa17.16■□□□□ 0.34
HDDC3-203ENST00000494993 UQCC2Q9BRT2 126 aa17.16■□□□□ 0.34
HDDC3-203ENST00000494993 TRAV41A0A0B4J266 112 aa17.15■□□□□ 0.34
HDDC3-203ENST00000494993 RGS11O94810 467 aa17.15■□□□□ 0.34
HDDC3-203ENST00000494993 LY86O95711 162 aa17.15■□□□□ 0.34
HDDC3-203ENST00000494993 CHATP28329 748 aa17.15■□□□□ 0.34
HDDC3-203ENST00000494993 GNB1P62873 340 aa17.15■□□□□ 0.34
HDDC3-203ENST00000494993 C5orf64Q2M2E5 130 aa17.15■□□□□ 0.34
HDDC3-203ENST00000494993 C6orf141Q5SZD1 244 aa17.15■□□□□ 0.34
HDDC3-203ENST00000494993 FAM46BQ96A09 425 aa17.15■□□□□ 0.34
HDDC3-203ENST00000494993 SAA2-SAA4A0A096LPE2 208 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 EFCAB10A6NFE3 127 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 NDUFA3O95167 84 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 CD1AP06126 327 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 SAA2P0DJI9 122 aaPredicted RBP17.14■□□□□ 0.33
HDDC3-203ENST00000494993 CELP19835 753 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 BLVRBP30043 206 aaPredicted RBP17.14■□□□□ 0.33
HDDC3-203ENST00000494993 OR3A3P47888 321 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 RAB9AP51151 201 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 LIN54Q6MZP7 749 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 NPBQ8NG41 125 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 THRSPQ92748 146 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 GALMQ96C23 342 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 CST11Q9H112 138 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 GHRLQ9UBU3 117 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 DNAH7Q8WXX0 4024 aa17.14■□□□□ 0.33
HDDC3-203ENST00000494993 MAPK3P27361 379 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-203ENST00000494993 HMGN3Q15651 99 aa17.13■□□□□ 0.33
HDDC3-203ENST00000494993 LRRC36Q1X8D7 754 aa17.13■□□□□ 0.33
HDDC3-203ENST00000494993 MINDY2Q8NBR6 621 aa17.13■□□□□ 0.33
HDDC3-203ENST00000494993 OR2AK2Q8NG84 335 aa17.13■□□□□ 0.33
HDDC3-203ENST00000494993 DCUN1D4Q92564 292 aa17.13■□□□□ 0.33
HDDC3-203ENST00000494993 CNOT2Q9NZN8 540 aaKnown RBP17.13■□□□□ 0.33
HDDC3-203ENST00000494993 KIAA1456Q9P272 454 aa17.13■□□□□ 0.33
HDDC3-203ENST00000494993 LRRC42Q9Y546 428 aa17.13■□□□□ 0.33
HDDC3-203ENST00000494993 SMAD5-AS1Q9Y6J3 95 aa17.13■□□□□ 0.33
HDDC3-203ENST00000494993 C3orf84H3BNL1 204 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 WNT4P56705 351 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 NDPQ00604 133 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 FAM71F2Q6NXP2 309 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 ZNF429Q86V71 674 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 DHRSXQ8N5I4 330 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 NEDD4LQ96PU5 975 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 SULT4A1Q9BR01 284 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 IFI27L2Q9H2X8 130 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 ISYNA1Q9NPH2 558 aa17.12■□□□□ 0.33
HDDC3-203ENST00000494993 OVOL1O14753 267 aa17.11■□□□□ 0.33
HDDC3-203ENST00000494993 MYL12BO14950 172 aa17.11■□□□□ 0.33
HDDC3-203ENST00000494993 UBBP0CG47 229 aa17.11■□□□□ 0.33
HDDC3-203ENST00000494993 C19orf54Q5BKX5 351 aa17.11■□□□□ 0.33
HDDC3-203ENST00000494993 FAM27D1Q5T7N8 215 aa17.11■□□□□ 0.33
HDDC3-203ENST00000494993 FBXO7Q9Y3I1 522 aa17.11■□□□□ 0.33
HDDC3-203ENST00000494993 CRIP2P52943 208 aaPredicted RBP17.1■□□□□ 0.33
HDDC3-203ENST00000494993 ECSCRQ19T08 205 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 LAIR2Q6ISS4 152 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 FAM131AQ6UXB0 335 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 PACRGLQ8N7B6 248 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 FAAP24Q9BTP7 215 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 ALX4Q9H161 411 aaPredicted RBP17.1■□□□□ 0.33
HDDC3-203ENST00000494993 C8orf4Q9NR00 106 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 ABRACLQ9P1F3 81 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 STEAP1Q9UHE8 339 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 PSORS1C1Q9UIG5 152 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 ERGIC3Q9Y282 383 aa17.1■□□□□ 0.33
HDDC3-203ENST00000494993 A0A1W2PN81 502 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 ST8SIA5O15466 376 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 SOX15O60248 233 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 CHRNA7P36544 502 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 ZNF660Q6AZW8 331 aaPredicted RBP17.09■□□□□ 0.33
HDDC3-203ENST00000494993 OR10K2Q6IF99 312 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 AHSA2Q719I0 299 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 C6orf201Q7Z4U5 140 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 IL1F10Q8WWZ1 152 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 DLX4Q92988 240 aaPredicted RBP17.09■□□□□ 0.33
HDDC3-203ENST00000494993 TMEM59Q9BXS4 323 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 FBXL15Q9H469 300 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 PIPOXQ9P0Z9 390 aa17.09■□□□□ 0.33
HDDC3-203ENST00000494993 RAB29O14966 203 aa17.08■□□□□ 0.32
HDDC3-203ENST00000494993 SAP30O75446 220 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms