RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 IGHV3-43A0A0B4J1X8 118 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 CLPSL1A2RUU4 121 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 SDCBPO00560 298 aaPredicted RBP7.02□□□□□ -1.29
ITGB1-217ENST00000494395 TOR1AO14656 332 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 SPINT2O43291 252 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 IGHV3-43DP0DP04 118 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 TGFBR1P36897 503 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 CEACAM3P40198 252 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 KRTAP10-3P60369 221 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 HABP2Q14520 560 aaPredicted RBP7.02□□□□□ -1.29
ITGB1-217ENST00000494395 GNMTQ14749 295 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 LY6G6FQ5SQ64 297 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 SFXN4Q6P4A7 337 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 TMEM219Q86XT9 240 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 Q8N2B8 174 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 OR56B1Q8NGI3 324 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 ARHGAP5-AS1Q96IT6 56 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 KCTD7Q96MP8 289 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 RANBP3Q9H6Z4 567 aaPredicted RBP7.02□□□□□ -1.29
ITGB1-217ENST00000494395 BEX1Q9HBH7 125 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 PITPNC1Q9UKF7 332 aa7.02□□□□□ -1.29
ITGB1-217ENST00000494395 AMMECR1Q9Y4X0 333 aaPredicted RBP7.02□□□□□ -1.29
ITGB1-217ENST00000494395 LOC100506127A0A0U1RQW1 187 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 A0A1W2PPE3 182 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 MFNGO00587 321 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 HIST1H1DP16402 221 aaKnown RBP7.01□□□□□ -1.29
ITGB1-217ENST00000494395 ZNF134P52741 427 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 HTD2P86397 168 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 ZNF816Q0VGE8 651 aaPredicted RBP7.01□□□□□ -1.29
ITGB1-217ENST00000494395 MADCAM1Q13477 382 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 TIMM50Q3ZCQ8 353 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 MORN2Q502X0 79 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 CT45A1Q5HYN5 189 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 CCDC144NLQ6NUI1 221 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 Q6ZTK2 550 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 MOB1BQ7L9L4 216 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 OR8H3Q8N146 312 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 PRR18Q8N4B5 295 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 C3orf56Q8N813 242 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 OR13F1Q8NGS4 319 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 OR10R2Q8NGX6 335 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 CT45A3Q8NHU0 189 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 TOMM40LQ969M1 308 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 RPEQ96AT9 228 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 SLC25A38Q96DW6 304 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 RIMS4Q9H426 269 aaPredicted RBP7.01□□□□□ -1.29
ITGB1-217ENST00000494395 ZNF702PQ9H963 129 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 Q9N2K0 584 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 RAB18Q9NP72 206 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 RAB9BQ9NP90 201 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 C12orf4Q9NQ89 552 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.01□□□□□ -1.29
ITGB1-217ENST00000494395 ABCB10Q9NRK6 738 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 JPT1Q9UK76 154 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 RNF114Q9Y508 228 aa7.01□□□□□ -1.29
ITGB1-217ENST00000494395 HSD17B6O14756 317 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 TIMM23O14925 209 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 YPEL1O60688 119 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 AMY1AP04745 511 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 CD24P25063 80 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 BRS3P32247 399 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 PPP1CCP36873 323 aaKnown RBP7□□□□□ -1.29
ITGB1-217ENST00000494395 KIR2DS4P43632 304 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 RAB7AP51149 207 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 SCAND1P57086 179 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 HLA-DRB3P79483 266 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 MXD1Q05195 221 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 EBI3Q14213 229 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 C16orf82Q7Z2V1 217 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 ODF3L1Q8IXM7 274 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 OR52L2PQ8NGH6 319 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 OR10V1Q8NGI7 309 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 OR10X1Q8NGY0 326 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 LGALS14Q8TCE9 139 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 WIPF2Q8TF74 440 aaPredicted RBP7□□□□□ -1.29
ITGB1-217ENST00000494395 GALMQ96C23 342 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 RAB3CQ96E17 227 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 YPEL2Q96QA6 119 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 CITED1Q99966 193 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 CMSS1Q9BQ75 279 aaKnown RBP7□□□□□ -1.29
ITGB1-217ENST00000494395 FUNDC2Q9BWH2 189 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 VCX3AQ9NNX9 186 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 SERTAD4Q9NUC0 356 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 KCNIP1Q9NZI2 227 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 GNG12Q9UBI6 72 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 DAPK2Q9UIK4 370 aa7□□□□□ -1.29
ITGB1-217ENST00000494395 IGHV1-3A0A0C4DH29 117 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 IGKV1-6A0A0C4DH72 117 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 NUDT19A8MXV4 375 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 AIREO43918 545 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 TMEM127O75204 238 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 OR2F2O95006 317 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 GAPDHP04406 335 aaKnown RBP6.99□□□□□ -1.29
ITGB1-217ENST00000494395 SNRNP70P08621 437 aaKnown RBP6.99□□□□□ -1.29
ITGB1-217ENST00000494395 FCGR3AP08637 254 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 GNB3P16520 340 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 MNDAP41218 407 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 ALDH3B2P48448 385 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 ARHGDIBP52566 201 aa6.99□□□□□ -1.29
ITGB1-217ENST00000494395 SRSF4Q08170 494 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms