RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 GNB1LQ9BYB4 327 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 OR10A2Q9H208 303 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 MOB1AQ9H8S9 216 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 EDA2RQ9HAV5 297 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 SMCO4Q9NRQ5 59 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 MED31Q9Y3C7 131 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 ORC6Q9Y5N6 252 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 ITGB4P16144 1822 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 SHROOM2Q13796 1616 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 PREX2Q70Z35 1606 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 KDM6AO15550 1401 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 PRG4Q92954 1404 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 LTN1O94822 1766 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 ABCA9Q8IUA7 1624 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 A0A087WWV3 80 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 CCDC179H3BU77 68 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 NPFFO15130 113 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 BCL2L11O43521 198 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 TBL1XO60907 577 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 CXorf1O96002 111 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 ATP1B1P05026 303 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF728P0DKX0 622 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 CHRNB2P17787 502 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 SAA4P35542 130 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 UBA52P62987 128 aaKnown RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 GRB2P62993 217 aaKnown RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 EIF5AP63241 154 aaKnown RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 TECRLQ5HYJ1 363 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 MS4A13Q5J8X5 152 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 PVRIGQ6DKI7 326 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 SLC35E4Q6ICL7 350 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 TMUB2Q71RG4 321 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF440Q8IYI8 595 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 CIARTQ8N365 385 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 LINC00471Q8N535 108 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 STPG4Q8N801 248 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 BPIFB6Q8NFQ5 453 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 OR51G1Q8NGK1 321 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 Q8TCH9 128 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 KLK6Q92876 244 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 DNAJA3Q96EY1 480 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF419Q96HQ0 510 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 OR4C12Q96R67 309 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 S100A13Q99584 98 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 RARRES2Q99969 163 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF471Q9BX82 626 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 PLA2G12BQ9BX93 195 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 TUBA4BQ9H853 241 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 C3orf14Q9HBI5 128 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 FBXL12Q9NXK8 326 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF586Q9NXT0 402 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 PCYOX1Q9UHG3 505 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 VAX2Q9UIW0 290 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 CYSLTR1Q9Y271 337 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF256Q9Y2P7 627 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 YTHDF2Q9Y5A9 579 aaKnown RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 REREQ9P2R6 1566 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 KNDC1Q76NI1 1749 aa3.45□□□□□ -1.86
BRCA1-220ENST00000492859 NUP210Q8TEM1 1887 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-220ENST00000492859 DISP1Q96F81 1524 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 CROCC2H7BZ55 1655 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 KIF1AQ12756 1690 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF638Q14966 1978 aaKnown RBP3.44□□□□□ -1.86
BRCA1-220ENST00000492859 ERVK-7P63135 1459 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 A0A087WXM4 84 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 SAA2-SAA4A0A096LPE2 208 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 TEX50A0A1B0GTY4 177 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 C7orf71A4D174 169 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 SHISA9B4DS77 424 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 B4DXG7 233 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 K7EPK0 472 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 TECPR2O15040 1411 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 NUDT14O95848 222 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 IGHG2P01859 326 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 ATP5G1P05496 136 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 GPX1P07203 203 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 CD14P08571 375 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 NMBP08949 121 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 IGLC6P0CF74 106 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 LAMP1P11279 417 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 PGAM2P15259 253 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 KLK7P49862 253 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 POU3F1Q03052 451 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-220ENST00000492859 IL15RAQ13261 267 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 RIGQ13278 110 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 ENDOGQ14249 297 aaKnown RBP3.44□□□□□ -1.86
BRCA1-220ENST00000492859 TMEM255AQ5JRV8 349 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF506Q5JVG8 444 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 NXNL2Q5VZ03 156 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 EIF5AL1Q6IS14 154 aaKnown RBP3.44□□□□□ -1.86
BRCA1-220ENST00000492859 ALKAL2Q6UX46 152 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 C1QL2Q7Z5L3 287 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 SGPP2Q8IWX5 399 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 C11orf53Q8IXP5 236 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 FAM71E2Q8N5Q1 922 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 DEFB125Q8N687 156 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 GVQW1Q8N7I0 195 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 SLC35G3Q8N808 338 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 OR52R1Q8NGF1 315 aa3.44□□□□□ -1.86
BRCA1-220ENST00000492859 RHOXF1Q8NHV9 184 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms