RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 OR2AK2Q8NG84 335 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 IL1F10Q8WWZ1 152 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 YPEL2Q96QA6 119 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 STEAP1Q9UHE8 339 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 AK3Q9UIJ7 227 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 HSF4Q9ULV5 492 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 MGAT4AQ9UM21 535 aa11.97□□□□□ -0.49
USP39-217ENST00000491659 TSSC4Q9Y5U2 329 aaPredicted RBP11.97□□□□□ -0.49
USP39-217ENST00000491659 PLXNB1O43157 2135 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 TRAV1-2A0A0B4J238 106 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 TRDV1A0A1B0GX56 115 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 DENRO43583 198 aaKnown RBP11.96□□□□□ -0.49
USP39-217ENST00000491659 PSMB9P28065 219 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 VEGFCP49767 419 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 PDLIM3Q53GG5 364 aaPredicted RBP11.96□□□□□ -0.49
USP39-217ENST00000491659 ZNF880Q6PDB4 577 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 C5orf24Q7Z6I8 188 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 OR8H1Q8NGG4 311 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 OR56B1Q8NGI3 324 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 CHPT1Q8WUD6 406 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 FCGR1BQ92637 280 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 C12orf4Q9NQ89 552 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 BATF3Q9NR55 127 aa11.96□□□□□ -0.49
USP39-217ENST00000491659 LIN7CQ9NUP9 197 aaKnown RBP11.96□□□□□ -0.49
USP39-217ENST00000491659 TRBV6-6A0A0A6YYG2 114 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 TMEM272A0A1B0GTI8 110 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 IGHG2P01859 326 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 GALP22466 123 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 SLC35B1P78383 322 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 HLA-DRB3P79483 266 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 LSAMPQ13449 338 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 C2orf76Q3KRA6 126 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 TCTEX1D4Q5JR98 221 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 UBE2UQ5VVX9 321 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 CD200R1LQ6Q8B3 271 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 C10orf99Q6UWK7 81 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 CMSS1Q9BQ75 279 aaKnown RBP11.95□□□□□ -0.5
USP39-217ENST00000491659 PECRQ9BY49 303 aa11.95□□□□□ -0.5
USP39-217ENST00000491659 YTHDF1Q9BYJ9 559 aaKnown RBP11.95□□□□□ -0.5
USP39-217ENST00000491659 NOTCH1P46531 2555 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 FOXI3A8MTJ6 420 aaPredicted RBP11.94□□□□□ -0.5
USP39-217ENST00000491659 ZNF736B4DX44 427 aaPredicted RBP11.94□□□□□ -0.5
USP39-217ENST00000491659 LDLRAD4O15165 306 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 PF4P02776 101 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 RAB3BP20337 219 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 OR10A3P58181 314 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 MRPS15P82914 257 aaKnown RBP11.94□□□□□ -0.5
USP39-217ENST00000491659 Q6ZPA2 131 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 SPARTQ8N0X7 666 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 Q8N9W7 124 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 ARHGAP5-AS1Q96IT6 56 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 NOL4LQ96MY1 436 aaPredicted RBP11.94□□□□□ -0.5
USP39-217ENST00000491659 S1PR3Q99500 378 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 RASL11BQ9BPW5 248 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 HDHD3Q9BSH5 251 aaPredicted RBP11.94□□□□□ -0.5
USP39-217ENST00000491659 ABCG5Q9H222 651 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 RAB22AQ9UL26 194 aa11.94□□□□□ -0.5
USP39-217ENST00000491659 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 IFITM5A6NNB3 132 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 G3V4G9 280 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 AP4M1O00189 453 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 HSPA12AO43301 675 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
USP39-217ENST00000491659 GPR12P47775 334 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 SAMD5Q5TGI4 173 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 C22orf42Q6IC83 251 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 FAM71F2Q6NXP2 309 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 ZNF833PQ6ZTB9 187 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 ZNF329Q86UD4 541 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 ODF3L1Q8IXM7 274 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 STPG2Q8N412 459 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 COMMD1Q8N668 190 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 GON7Q9BXV9 100 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 MRPL20Q9BYC9 149 aaKnown RBP11.93□□□□□ -0.5
USP39-217ENST00000491659 IFI27L2Q9H2X8 130 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 PIPOXQ9P0Z9 390 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 SLC23A1Q9UHI7 598 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 LINC00527Q9UJ94 153 aa11.93□□□□□ -0.5
USP39-217ENST00000491659 SHISA3A0PJX4 238 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 CD3GP09693 182 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 CD33P20138 364 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 RAB6AP20340 208 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 ZBTB25P24278 435 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 GADD45AP24522 165 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 OR3A3P47888 321 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 TMEM50BP56557 158 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 MMDQ15546 238 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 PLAC9Q5JTB6 97 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 FAM71E2Q8N5Q1 922 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 EDARADDQ8WWZ3 215 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 RAB3CQ96E17 227 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 NABP2Q9BQ15 211 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 Q9N2K0 584 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 PLSCR3Q9NRY6 295 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 STUB1Q9UNE7 303 aa11.92□□□□□ -0.5
USP39-217ENST00000491659 ITGB1BP1O14713 200 aa11.91□□□□□ -0.5
USP39-217ENST00000491659 RAB29O14966 203 aa11.91□□□□□ -0.5
USP39-217ENST00000491659 SOX6P35712 828 aa11.91□□□□□ -0.5
USP39-217ENST00000491659 F2RL1P55085 397 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms