RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, human

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFXN4-208	ENST00000490417	FOXRED2	Q8IWF2	684 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	IZUMO1	Q8IYV9	350 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	LYG1	Q8N1E2	194 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	OR51D1	Q8NGF3	324 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	OR10V1	Q8NGI7	309 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	OR1L1	Q8NH94	360 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	UBALD1	Q8TB05	177 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	SETD6	Q8TBK2	473 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	CHPT1	Q8WUD6	406 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	IL1F10	Q8WWZ1	152 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	YPEL2	Q96QA6	119 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	SULT4A1	Q9BR01	284 aa		10.84	□□□□□ -0.67
SFXN4-208	ENST00000490417	WNK1	Q9H4A3	2382 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	RAB3B	P20337	219 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	REG1B	P48304	166 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	ZNF137P	P52743	207 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	QRFP	P83859	136 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	EBI3	Q14213	229 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	HNF4G	Q14541	408 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	NSUN5P1	Q3KNT7	163 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	UBE2U	Q5VVX9	321 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	CDPF1	Q6NVV7	123 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	FAM89B	Q8N5H3	189 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	S1PR3	Q99500	378 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	RASL11B	Q9BPW5	248 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	NICN1	Q9BSH3	213 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	LPAR5	Q9H1C0	372 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	C12orf4	Q9NQ89	552 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	PIPOX	Q9P0Z9	390 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	SSR3	Q9UNL2	185 aa		10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.83	□□□□□ -0.68
SFXN4-208	ENST00000490417	TRBV6-6	A0A0A6YYG2	114 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	TCRBV4S1A1T	A0A5B7	111 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	SERPINE3	A8MV23	424 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	HSPA12A	O43301	675 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	KCNAB3	O43448	404 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	LANCL1	O43813	399 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	RRP9	O43818	475 aa	Known RBP	10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	NAPSA	O96009	420 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	CD28	P10747	220 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	ZBTB25	P24278	435 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	VEGFC	P49767	419 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	HMGN3	Q15651	99 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	SSX1	Q16384	188 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	CT45A1	Q5HYN5	189 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	CD200R1L	Q6Q8B3	271 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	SPART	Q8N0X7	666 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	CT45A3	Q8NHU0	189 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	R3HDM4	Q96D70	268 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	CMSS1	Q9BQ75	279 aa	Known RBP	10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	LIN7C	Q9NUP9	197 aa	Known RBP	10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	STUB1	Q9UNE7	303 aa		10.82	□□□□□ -0.68
SFXN4-208	ENST00000490417	PSMB11	A5LHX3	300 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	IFITM5	A6NNB3	132 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	RAB29	O14966	203 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	SCGN	O76038	276 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	PF4	P02776	101 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	CD3G	P09693	182 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	PF4V1	P10720	104 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	FGF9	P31371	208 aa	Predicted RBP	10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	PPP1CC	P36873	323 aa	Known RBP	10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	DIAPH2-AS1	Q14236	149 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	UTF1	Q5T230	341 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	HES5	Q5TA89	166 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	FAM71F2	Q6NXP2	309 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	ZNF773	Q6PK81	442 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	SLC35E3	Q7Z769	313 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	TPRA1	Q86W33	373 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	COMMD1	Q8N668	190 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	C5orf56	Q8N8D9	126 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	ZNF439	Q8NDP4	499 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	OR52L2P	Q8NGH6	319 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	ST6GALNAC6	Q969X2	333 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	PTX4	Q96A99	478 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	RAB3C	Q96E17	227 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	EAF1	Q96JC9	268 aa	Predicted RBP	10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	FANCD2OS	Q96PS1	177 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	CITED2	Q99967	270 aa	Predicted RBP	10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	RSRP1	Q9BUV0	290 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	VCX3A	Q9NNX9	186 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	AK3	Q9UIJ7	227 aa		10.81	□□□□□ -0.68
SFXN4-208	ENST00000490417	ITGB1BP1	O14713	200 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	SOCS1	O15524	211 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	TSPAN15	O95858	294 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	TALDO1	P37837	337 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	SERPINB10	P48595	397 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	ZNF134	P52741	427 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	CLDN12	P56749	244 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	CD83	Q01151	205 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	KIR2DS1	Q14954	304 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	C22orf42	Q6IC83	251 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	ZNF880	Q6PDB4	577 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	ARHGAP5-AS1	Q96IT6	56 aa		10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	RRP15	Q9Y3B9	282 aa	Known RBP	10.8	□□□□□ -0.68
SFXN4-208	ENST00000490417	IGHV3-72	A0A0B4J1Y9	119 aa		10.79	□□□□□ -0.68
SFXN4-208	ENST00000490417	TMEM272	A0A1B0GTI8	110 aa		10.79	□□□□□ -0.68
SFXN4-208	ENST00000490417	NOTO	A8MTQ0	251 aa		10.79	□□□□□ -0.68
SFXN4-208	ENST00000490417	AP4M1	O00189	453 aa		10.79	□□□□□ -0.68
SFXN4-208	ENST00000490417	SLC31A2	O15432	143 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms