RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ACTBP60709 375 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 ACTG1P63261 375 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 XRCC4Q13426 336 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 XKRXQ6PP77 449 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 TMEM75Q8N9X5 138 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 OR11H1Q8NG94 326 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 OR10A6Q8NH74 314 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 TTTY12Q9BZ98 90 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 CXCL16Q9H2A7 254 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 TXNL4BQ9NX01 149 aaKnown RBP1.48□□□□□ -2.17
CD46-216ENST00000490278 MS4A12Q9NXJ0 267 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 DNAJC12Q9UKB3 198 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 MRPS16Q9Y3D3 137 aaKnown RBP1.48□□□□□ -2.17
CD46-216ENST00000490278 LRPPRCP42704 1394 aaKnown RBP1.47□□□□□ -2.17
CD46-216ENST00000490278 ATAD5Q96QE3 1844 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 SLIT2O94813 1529 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 A0A1W2PQL4 384 aaPredicted RBP1.47□□□□□ -2.17
CD46-216ENST00000490278 VPS37CA5D8V6 355 aaPredicted RBP1.47□□□□□ -2.17
CD46-216ENST00000490278 LINC00862A6NCI5 91 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 ERICH4A6NGS2 130 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 LY6HO94772 140 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 SLC25A16P16260 332 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 CDK2P24941 298 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 AGTR1P30556 359 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 SLAMF1Q13291 335 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 C1DQ13901 141 aaKnown RBP1.47□□□□□ -2.17
CD46-216ENST00000490278 SS18Q15532 418 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 RASL11AQ6T310 242 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 CRLF3Q8IUI8 442 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 OR51H1Q8NH63 302 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 RNASE11Q8TAA1 199 aaKnown RBP1.47□□□□□ -2.17
CD46-216ENST00000490278 TNFAIP8L1Q8WVP5 186 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 LRRC45Q96CN5 670 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 SMIM12Q96EX1 92 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 MBOAT7Q96N66 472 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 MGLLQ99685 303 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 ZNF251Q9BRH9 671 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 MND1Q9BWT6 205 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 CDCA4Q9BXL8 241 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 UBQLN4Q9NRR5 601 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 C1orf109Q9NX04 203 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 FAM206AQ9NX38 181 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 GLS2Q9UI32 602 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.47□□□□□ -2.17
CD46-216ENST00000490278 SNX10Q9Y5X0 201 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 BAHCC1Q9P281 2608 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 OTOFQ9HC10 1997 aa1.47□□□□□ -2.17
CD46-216ENST00000490278 ADGRB3O60242 1522 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 ADAMTS7Q9UKP4 1686 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 IGHV3-73A0A0B4J1V6 119 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 DHRS12A0PJE2 317 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 ERICH2A1L162 156 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 IQCF5A8MTL0 148 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 FNDC10F2Z333 226 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 F8VZ95 297 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 STK16O75716 305 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 ADORA1P30542 326 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 OR1E2P47887 323 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 FGF12P61328 243 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 TMED1Q13445 227 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 ZNHIT3Q15649 155 aaPredicted RBP1.46□□□□□ -2.18
CD46-216ENST00000490278 C16orf78Q8WTQ4 265 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 ABHD14BQ96IU4 210 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 TRNT1Q96Q11 434 aaKnown RBP1.46□□□□□ -2.18
CD46-216ENST00000490278 MED28Q9H204 178 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 C11orf1Q9H5F2 150 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 C16orf95Q9H693 158 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 ICE1Q9Y2F5 2266 aa1.46□□□□□ -2.18
CD46-216ENST00000490278 COL11A1P12107 1806 aaPredicted RBP1.45□□□□□ -2.18
CD46-216ENST00000490278 ZNF638Q14966 1978 aaKnown RBP1.45□□□□□ -2.18
CD46-216ENST00000490278 ADAMTSL1Q8N6G6 1762 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 MUC21A0A0G2JKD1 596 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 MUC21A0A140T8X8 626 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 C19orf71A6NCJ1 209 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 SMLR1H3BR10 107 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 ARL6IP5O75915 188 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 RD3LP0DJH9 198 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 OR13C7P0DN81 318 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 ESDP10768 282 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 F8A1P23610 371 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 ATP6V0CP27449 155 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 OPRM1P35372 400 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 CD200P41217 278 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 TSPEAR-AS2P59090 65 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 PMS2P3Q13401 168 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 CLEC12BQ2HXU8 276 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 FAM45BPQ6NSW5 357 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 SCGB1D4Q6XE38 83 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 BOD1L2Q8IYS8 172 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 OR52E4Q8NGH9 312 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 ACY3Q96HD9 319 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 TMEM208Q9BTX3 173 aa1.45□□□□□ -2.18
CD46-216ENST00000490278 DAPL1A0PJW8 107 aa1.44□□□□□ -2.18
CD46-216ENST00000490278 TRPC5OSA6NMA1 111 aa1.44□□□□□ -2.18
CD46-216ENST00000490278 SCN2BO60939 215 aa1.44□□□□□ -2.18
CD46-216ENST00000490278 IGLV3-27P01718 113 aa1.44□□□□□ -2.18
CD46-216ENST00000490278 CFL1P23528 166 aaKnown RBP1.44□□□□□ -2.18
CD46-216ENST00000490278 LGALS9CQ6DKI2 356 aa1.44□□□□□ -2.18
CD46-216ENST00000490278 PLCZ1Q86YW0 608 aa1.44□□□□□ -2.18
CD46-216ENST00000490278 NATD1Q8N6N6 113 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms