RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 IGHG2P01859 326 aa13.85□□□□□ -0.19
ATG3-205ENST00000488910 PPP1CCP36873 323 aaKnown RBP13.85□□□□□ -0.19
ATG3-205ENST00000488910 TCTEX1D4Q5JR98 221 aa13.85□□□□□ -0.19
ATG3-205ENST00000488910 CHPT1Q8WUD6 406 aa13.85□□□□□ -0.19
ATG3-205ENST00000488910 STEAP1Q9UHE8 339 aa13.85□□□□□ -0.19
ATG3-205ENST00000488910 MGAT4AQ9UM21 535 aa13.85□□□□□ -0.19
ATG3-205ENST00000488910 PSMB11A5LHX3 300 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 GNMTQ14749 295 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 UBE2UQ5VVX9 321 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 C5orf24Q7Z6I8 188 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 SLC35E3Q7Z769 313 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 Q8N9W7 124 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 OR56B1Q8NGI3 324 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 PLSCR3Q9NRY6 295 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 LIN7CQ9NUP9 197 aaKnown RBP13.84□□□□□ -0.19
ATG3-205ENST00000488910 AK3Q9UIJ7 227 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 RAB22AQ9UL26 194 aa13.84□□□□□ -0.19
ATG3-205ENST00000488910 FOXI3A8MTJ6 420 aaPredicted RBP13.83□□□□□ -0.2
ATG3-205ENST00000488910 SERPINE3A8MV23 424 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 LDLRAD4O15165 306 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 MYL9P24844 172 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 VEGFCP49767 419 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 TMEM50BP56557 158 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 CLDN12P56749 244 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 FOXRED2Q8IWF2 684 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 SPARTQ8N0X7 666 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 OR2AK2Q8NG84 335 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 SETD6Q8TBK2 473 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 IL1F10Q8WWZ1 152 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 FCGR1BQ92637 280 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 ABCG5Q9H222 651 aa13.83□□□□□ -0.2
ATG3-205ENST00000488910 A0A1W2PRX2 142 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 ZNF736B4DX44 427 aaPredicted RBP13.82□□□□□ -0.2
ATG3-205ENST00000488910 SLC35B1P78383 322 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 LSAMPQ13449 338 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 C10orf99Q6UWK7 81 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 C1QL4Q86Z23 238 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 ODF3L1Q8IXM7 274 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 COMMD1Q8N668 190 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 ARHGAP5-AS1Q96IT6 56 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 S1PR3Q99500 378 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 RASL11BQ9BPW5 248 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 PECRQ9BY49 303 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 GHITMQ9H3K2 345 aa13.82□□□□□ -0.2
ATG3-205ENST00000488910 TMEM272A0A1B0GTI8 110 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 IFITM5A6NNB3 132 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 G3V4G9 280 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 ITGB1BP1O14713 200 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 PF4V1P10720 104 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 RAB3BP20337 219 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 GPR12P47775 334 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 HES5Q5TA89 166 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 SAMD5Q5TGI4 173 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 FAM71F2Q6NXP2 309 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 Q6ZPA2 131 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 ZNF833PQ6ZTB9 187 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 WFDC9Q8NEX5 89 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 NOL4LQ96MY1 436 aaPredicted RBP13.81□□□□□ -0.2
ATG3-205ENST00000488910 Q9N2K0 584 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 C12orf4Q9NQ89 552 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 PIPOXQ9P0Z9 390 aa13.81□□□□□ -0.2
ATG3-205ENST00000488910 NOTCH3Q9UM47 2321 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 AP4M1O00189 453 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 RAB29O14966 203 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 ZBTB25P24278 435 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 F2RL1P55085 397 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 BEAN1Q3B7T3 259 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 KPRPQ5T749 579 aaPredicted RBP13.8□□□□□ -0.2
ATG3-205ENST00000488910 C22orf42Q6IC83 251 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 ZNF329Q86UD4 541 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 STPG2Q8N412 459 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 FAM71E2Q8N5Q1 922 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 NABP2Q9BQ15 211 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 CMSS1Q9BQ75 279 aaKnown RBP13.8□□□□□ -0.2
ATG3-205ENST00000488910 HDHD3Q9BSH5 251 aaPredicted RBP13.8□□□□□ -0.2
ATG3-205ENST00000488910 GON7Q9BXV9 100 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 ZFP57Q9NU63 452 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 SLC23A1Q9UHI7 598 aa13.8□□□□□ -0.2
ATG3-205ENST00000488910 SHISA3A0PJX4 238 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 LINC01548A6NM66 108 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 RAB6AP20340 208 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 PSMB9P28065 219 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 FGF9P31371 208 aaPredicted RBP13.79□□□□□ -0.2
ATG3-205ENST00000488910 OR10A3P58181 314 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 HLA-DRB3P79483 266 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 KHDC1LQ5JSQ8 128 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 PLAC9Q5JTB6 97 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 EDARADDQ8WWZ3 215 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 PTX4Q96A99 478 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 RAB3CQ96E17 227 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 MRPL20Q9BYC9 149 aaKnown RBP13.79□□□□□ -0.2
ATG3-205ENST00000488910 IFI27L2Q9H2X8 130 aa13.79□□□□□ -0.2
ATG3-205ENST00000488910 SAA2-SAA4A0A096LPE2 208 aa13.78□□□□□ -0.2
ATG3-205ENST00000488910 SAA2P0DJI9 122 aaPredicted RBP13.78□□□□□ -0.2
ATG3-205ENST00000488910 CD33P20138 364 aa13.78□□□□□ -0.2
ATG3-205ENST00000488910 GADD45AP24522 165 aa13.78□□□□□ -0.2
ATG3-205ENST00000488910 SLC6A1P30531 599 aa13.78□□□□□ -0.2
ATG3-205ENST00000488910 SOX6P35712 828 aa13.78□□□□□ -0.2
ATG3-205ENST00000488910 CEACAM6P40199 344 aa13.78□□□□□ -0.2
ATG3-205ENST00000488910 OR3A3P47888 321 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms