RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 IGLV1-40P01703 118 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 CNTFRP26992 372 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 CHATP28329 748 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 CAPGP40121 348 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 TAS2R43P59537 309 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 GNB1P62873 340 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 KIAA0141Q14154 515 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-231ENST00000488905 NKAIN3Q8N8D7 197 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 OR1N2Q8NGR9 330 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 DERL3Q96Q80 235 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 NABP2Q9BQ15 211 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 ZNF251Q9BRH9 671 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 LYSTQ99698 3801 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 IGHV7-81A0A0B4J1V7 117 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 HTD2P86397 168 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 DOC2BQ14184 412 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 C5orf64Q2M2E5 130 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 C6orf141Q5SZD1 244 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 ZNF833PQ6ZTB9 187 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 CYGBQ8WWM9 190 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 FAM46BQ96A09 425 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 RITA1Q96K30 269 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 OR5B12Q96R08 314 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 ANKRD60Q9BZ19 345 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 ISYNA1Q9NPH2 558 aa14.31□□□□□ -0.12
HDAC6-231ENST00000488905 SAA2-SAA4A0A096LPE2 208 aa14.3□□□□□ -0.12
HDAC6-231ENST00000488905 TRAV41A0A0B4J266 112 aa14.3□□□□□ -0.12
HDAC6-231ENST00000488905 YPEL1O60688 119 aa14.3□□□□□ -0.12
HDAC6-231ENST00000488905 BAG2O95816 211 aa14.3□□□□□ -0.12
HDAC6-231ENST00000488905 SAA2P0DJI9 122 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-231ENST00000488905 BLVRBP30043 206 aaPredicted RBP14.3□□□□□ -0.12
HDAC6-231ENST00000488905 C5orf24Q7Z6I8 188 aa14.3□□□□□ -0.12
HDAC6-231ENST00000488905 YPEL2Q96QA6 119 aa14.3□□□□□ -0.12
HDAC6-231ENST00000488905 UQCC2Q9BRT2 126 aa14.3□□□□□ -0.12
HDAC6-231ENST00000488905 SMAD5-AS1Q9Y6J3 95 aa14.3□□□□□ -0.12
HDAC6-231ENST00000488905 C3orf84H3BNL1 204 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 RGS11O94810 467 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 NDUFA3O95167 84 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 OR3A3P47888 321 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 RAB9AP51151 201 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 NDPQ00604 133 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 ST3GAL4Q11206 333 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 LY6G6FQ5SQ64 297 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 MINDY2Q8NBR6 621 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 SETD9Q8NE22 299 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 NPBQ8NG41 125 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 OR2AK2Q8NG84 335 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 GGHQ92820 318 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 CST11Q9H112 138 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 KIAA1456Q9P272 454 aa14.29□□□□□ -0.12
HDAC6-231ENST00000488905 CELP19835 753 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 MAPK3P27361 379 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-231ENST00000488905 HMGN3Q15651 99 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 ECSCRQ19T08 205 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 FAM27D1Q5T7N8 215 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 TTC23Q5W5X9 447 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 FAM71F2Q6NXP2 309 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 ZNF429Q86V71 674 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 DCUN1D4Q92564 292 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 THRSPQ92748 146 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 GALMQ96C23 342 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 IFI27L2Q9H2X8 130 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 GHRLQ9UBU3 117 aa14.28□□□□□ -0.12
HDAC6-231ENST00000488905 EFCAB10A6NFE3 127 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 OVOL1O14753 267 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 MYL12BO14950 172 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 CD1AP06126 327 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 CRIP2P52943 208 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-231ENST00000488905 LRRC36Q1X8D7 754 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 C19orf54Q5BKX5 351 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 LIN54Q6MZP7 749 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 FAM131AQ6UXB0 335 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 SULT4A1Q9BR01 284 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 ALX4Q9H161 411 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-231ENST00000488905 CNOT2Q9NZN8 540 aaKnown RBP14.27□□□□□ -0.13
HDAC6-231ENST00000488905 FBXO7Q9Y3I1 522 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 CSMD3Q7Z407 3707 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 STARD9Q9P2P6 4700 aa14.27□□□□□ -0.13
HDAC6-231ENST00000488905 A0A1W2PN81 502 aa14.26□□□□□ -0.13
HDAC6-231ENST00000488905 SAP30O75446 220 aa14.26□□□□□ -0.13
HDAC6-231ENST00000488905 CHRNA7P36544 502 aa14.26□□□□□ -0.13
HDAC6-231ENST00000488905 WNT4P56705 351 aa14.26□□□□□ -0.13
HDAC6-231ENST00000488905 NEDD4LQ96PU5 975 aa14.26□□□□□ -0.13
HDAC6-231ENST00000488905 ABRACLQ9P1F3 81 aa14.26□□□□□ -0.13
HDAC6-231ENST00000488905 ERGIC3Q9Y282 383 aa14.26□□□□□ -0.13
HDAC6-231ENST00000488905 LRRC42Q9Y546 428 aa14.26□□□□□ -0.13
HDAC6-231ENST00000488905 LINC01619G3V211 115 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 ST8SIA5O15466 376 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 SOX15O60248 233 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 UBBP0CG47 229 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 SLURP1P55000 103 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 GABPB1Q06547 395 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-231ENST00000488905 SVOPQ8N4V2 548 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 TCTEX1D1Q8N7M0 179 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 IL1F10Q8WWZ1 152 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 DLX4Q92988 240 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-231ENST00000488905 TMEM59Q9BXS4 323 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 TOLLIPQ9H0E2 274 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 PIPOXQ9P0Z9 390 aa14.25□□□□□ -0.13
HDAC6-231ENST00000488905 STEAP1Q9UHE8 339 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms