RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 AWAT2Q6E213 333 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 C10orf67Q8IYJ2 551 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 TMEM104Q8NE00 496 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 OR8U1Q8NH10 309 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 CT45A3Q8NHU0 189 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 CYGBQ8WWM9 190 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 ST6GALNAC6Q969X2 333 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 FAM46BQ96A09 425 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 SMIM19Q96E16 107 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 OR14A2Q96R54 314 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 CHCHD3Q9NX63 227 aaKnown RBP7.04□□□□□ -1.28
HLA-B-253ENST00000481849 SMPD3Q9NY59 655 aaPredicted RBP7.04□□□□□ -1.28
HLA-B-253ENST00000481849 DIMT1Q9UNQ2 313 aaKnown RBP7.04□□□□□ -1.28
HLA-B-253ENST00000481849 PEX16Q9Y5Y5 336 aa7.04□□□□□ -1.28
HLA-B-253ENST00000481849 TRBV5-5A0A0J9YX44 114 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 RRP9O43818 475 aaKnown RBP7.03□□□□□ -1.28
HLA-B-253ENST00000481849 CRTAPO75718 401 aaPredicted RBP7.03□□□□□ -1.28
HLA-B-253ENST00000481849 SLC6A1P30531 599 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 SOX6P35712 828 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 ECI1P42126 302 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 RPS11P62280 158 aaKnown RBP eCLIP7.03□□□□□ -1.28
HLA-B-253ENST00000481849 ADARB1P78563 741 aaKnown RBP7.03□□□□□ -1.28
HLA-B-253ENST00000481849 FOXE3Q13461 319 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 GPR176Q14439 515 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 GNMTQ14749 295 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 Q499Y3 187 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 YIF1BQ5BJH7 314 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 C6orf183Q5T699 404 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 DMKNQ6E0U4 476 aaPredicted RBP7.03□□□□□ -1.28
HLA-B-253ENST00000481849 SLC25A48Q6ZT89 311 aaKnown RBP7.03□□□□□ -1.28
HLA-B-253ENST00000481849 C8orf31Q8N9H6 132 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 ZNF439Q8NDP4 499 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 OR52L2PQ8NGH6 319 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 OR5M8Q8NGP6 311 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 TMEM80Q96HE8 168 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 KCTD7Q96MP8 289 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 OR5B12Q96R08 314 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 ASCL2Q99929 193 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 GON7Q9BXV9 100 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 SELENOIQ9C0D9 397 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 TMPRSS5Q9H3S3 457 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 SPACA1Q9HBV2 294 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 OR2S2Q9NQN1 319 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 RCC2Q9P258 522 aaKnown RBP7.03□□□□□ -1.28
HLA-B-253ENST00000481849 EXOSC1Q9Y3B2 195 aaKnown RBP7.03□□□□□ -1.28
HLA-B-253ENST00000481849 WSB1Q9Y6I7 421 aa7.03□□□□□ -1.28
HLA-B-253ENST00000481849 IRGMA1A4Y4 181 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 SEC14L6B5MCN3 397 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 G3V318 75 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 MGMTP16455 207 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 PPP1CCP36873 323 aaKnown RBP7.02□□□□□ -1.29
HLA-B-253ENST00000481849 CDX1P47902 265 aaPredicted RBP7.02□□□□□ -1.29
HLA-B-253ENST00000481849 LSAMPQ13449 338 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 KIR2DS1Q14954 304 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 MMDQ15546 238 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 FAM71E2Q8N5Q1 922 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 GGHQ92820 318 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 RITA1Q96K30 269 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 PGLYRP3Q96LB9 341 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 WWC2-AS2Q96NR7 200 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 TAF9BQ9HBM6 251 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 PARP11Q9NR21 331 aa7.02□□□□□ -1.29
HLA-B-253ENST00000481849 ZNF107Q9UII5 783 aaPredicted RBP7.02□□□□□ -1.29
HLA-B-253ENST00000481849 DSCAML1Q8TD84 2053 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 TRBV5-7A0A0A0MS05 114 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 TXNL1O43396 289 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 GPX5O75715 221 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 LY86O95711 162 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 ELANEP08246 267 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 FUT3P21217 361 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 CNTFRP26992 372 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 CAPGP40121 348 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 ACTBP60709 375 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 CFHR3Q02985 330 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 ST3GAL4Q11206 333 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 MED21Q13503 144 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 DCTN2Q13561 401 aaKnown RBP7.01□□□□□ -1.29
HLA-B-253ENST00000481849 ZNF260Q3ZCT1 412 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 MORN2Q502X0 79 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 C9orf66Q5T8R8 295 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 TMEM65Q6PI78 240 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 OR11H1Q8NG94 326 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 OR8H1Q8NGG4 311 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 C4orf3Q8WVX3 66 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 RDH12Q96NR8 316 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 DERL3Q96Q80 235 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 ABHD14AQ9BUJ0 271 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 MRPL20Q9BYC9 149 aaKnown RBP7.01□□□□□ -1.29
HLA-B-253ENST00000481849 KLK15Q9H2R5 256 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 GNB4Q9HAV0 340 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 RAB9BQ9NP90 201 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 KCNIP1Q9NZI2 227 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 ZMAT5Q9UDW3 170 aaKnown RBP7.01□□□□□ -1.29
HLA-B-253ENST00000481849 U3KQK5 164 aa7.01□□□□□ -1.29
HLA-B-253ENST00000481849 DNAH9Q9NYC9 4486 aa7□□□□□ -1.29
HLA-B-253ENST00000481849 MYL12BO14950 172 aa7□□□□□ -1.29
HLA-B-253ENST00000481849 ATP6V0E1O15342 81 aa7□□□□□ -1.29
HLA-B-253ENST00000481849 LANCL1O43813 399 aa7□□□□□ -1.29
HLA-B-253ENST00000481849 RAMP3O60896 148 aa7□□□□□ -1.29
HLA-B-253ENST00000481849 IGHG4P01861 327 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms