RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 CENPWQ5EE01 88 aa1.25□□□□□ -2.21
CALD1-219ENST00000480638 AGTRAPQ6RW13 159 aa1.25□□□□□ -2.21
CALD1-219ENST00000480638 MTERF4Q7Z6M4 381 aaKnown RBP1.25□□□□□ -2.21
CALD1-219ENST00000480638 MRPL52Q86TS9 123 aaKnown RBP1.25□□□□□ -2.21
CALD1-219ENST00000480638 DOLPP1Q86YN1 238 aa1.25□□□□□ -2.21
CALD1-219ENST00000480638 TIMM21Q9BVV7 248 aa1.25□□□□□ -2.21
CALD1-219ENST00000480638 PRRG3Q9BZD7 231 aa1.25□□□□□ -2.21
CALD1-219ENST00000480638 C11orf1Q9H5F2 150 aa1.25□□□□□ -2.21
CALD1-219ENST00000480638 TNIKQ9UKE5 1360 aa1.24□□□□□ -2.21
CALD1-219ENST00000480638 DSCAML1Q8TD84 2053 aa1.24□□□□□ -2.21
CALD1-219ENST00000480638 J3QQQ9 107 aa1.24□□□□□ -2.21
CALD1-219ENST00000480638 ESDP10768 282 aa1.24□□□□□ -2.21
CALD1-219ENST00000480638 HINT1P49773 126 aaPredicted RBP1.24□□□□□ -2.21
CALD1-219ENST00000480638 OR10A3P58181 314 aa1.24□□□□□ -2.21
CALD1-219ENST00000480638 RPL26P61254 145 aaKnown RBP1.24□□□□□ -2.21
CALD1-219ENST00000480638 ST13P4Q8IZP2 240 aaPredicted RBP1.24□□□□□ -2.21
CALD1-219ENST00000480638 ZNF283Q8N7M2 679 aa1.24□□□□□ -2.21
CALD1-219ENST00000480638 MND1Q9BWT6 205 aa1.24□□□□□ -2.21
CALD1-219ENST00000480638 TMEM216Q9P0N5 145 aa1.24□□□□□ -2.21
CALD1-219ENST00000480638 RPL26L1Q9UNX3 145 aaKnown RBP1.24□□□□□ -2.21
CALD1-219ENST00000480638 MRPS16Q9Y3D3 137 aaKnown RBP1.24□□□□□ -2.21
CALD1-219ENST00000480638 SDK1Q7Z5N4 2213 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 HECW2Q9P2P5 1572 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 IGHV3-15A0A0B4J1V0 119 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 A0A1B0GX12 115 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 C11orf86A6NJI1 115 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 C9J4A7 227 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 SULT1A2P50226 295 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 OR10J3Q5JRS4 329 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 C2orf91Q6ZV80 131 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 GLT6D1Q7Z4J2 308 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 SLC35F6Q8N357 371 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 SPACA4Q8TDM5 124 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 TMEM239Q8WW34 195 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 NAA38Q9BRA0 125 aaKnown RBP1.23□□□□□ -2.21
CALD1-219ENST00000480638 SPZ1Q9BXG8 430 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 METTL17Q9H7H0 456 aaPredicted RBP1.23□□□□□ -2.21
CALD1-219ENST00000480638 DOK5Q9P104 306 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 FN1P02751 2386 aaKnown RBP1.23□□□□□ -2.21
CALD1-219ENST00000480638 COL6A3P12111 3177 aa1.23□□□□□ -2.21
CALD1-219ENST00000480638 USP9XQ93008 2570 aaPredicted RBP1.23□□□□□ -2.21
CALD1-219ENST00000480638 DENND4BO75064 1496 aaPredicted RBP1.23□□□□□ -2.21
CALD1-219ENST00000480638 DNMT1P26358 1616 aaKnown RBP1.22□□□□□ -2.21
CALD1-219ENST00000480638 GNRH2O43555 120 aa1.22□□□□□ -2.21
CALD1-219ENST00000480638 GADD45AP24522 165 aa1.22□□□□□ -2.21
CALD1-219ENST00000480638 RCVRNP35243 200 aa1.22□□□□□ -2.21
CALD1-219ENST00000480638 NUP62P37198 522 aaPredicted RBP1.22□□□□□ -2.21
CALD1-219ENST00000480638 TRMT12Q53H54 448 aaKnown RBP1.22□□□□□ -2.21
CALD1-219ENST00000480638 Q6ZTI0 123 aa1.22□□□□□ -2.21
CALD1-219ENST00000480638 C10orf126Q8N4M7 172 aa1.22□□□□□ -2.21
CALD1-219ENST00000480638 OR5K1Q8NHB7 308 aa1.22□□□□□ -2.21
CALD1-219ENST00000480638 LRRC20Q8TCA0 184 aa1.22□□□□□ -2.21
CALD1-219ENST00000480638 HSPB9Q9BQS6 159 aa1.22□□□□□ -2.21
CALD1-219ENST00000480638 PUS1Q9Y606 427 aaKnown RBP eCLIP1.22□□□□□ -2.21
CALD1-219ENST00000480638 TEP1Q99973 2627 aaKnown RBP1.22□□□□□ -2.21
CALD1-219ENST00000480638 IGKV1D-43A0A0B4J1Z2 117 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 A0A1B0GVG6 124 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 EFCAB9A8MZ26 197 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 UBFD1O14562 309 aaKnown RBP1.21□□□□□ -2.22
CALD1-219ENST00000480638 GPR171O14626 319 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 CYTH3O43739 400 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 CST4P01036 141 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 CCL2P13500 99 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 PSMB3P49720 205 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 TNNC1P63316 161 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 UAP1Q16222 522 aaPredicted RBP1.21□□□□□ -2.22
CALD1-219ENST00000480638 COA5Q86WW8 74 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 LRRC6Q86X45 466 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 OR4P4Q8NGL7 312 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 MED18Q9BUE0 208 aa1.21□□□□□ -2.22
CALD1-219ENST00000480638 ANKRD17O75179 2603 aaKnown RBP1.2□□□□□ -2.22
CALD1-219ENST00000480638 FLNBO75369 2602 aaKnown RBP1.2□□□□□ -2.22
CALD1-219ENST00000480638 TNRC18O15417 2968 aaPredicted RBP1.2□□□□□ -2.22
CALD1-219ENST00000480638 BPTFQ12830 3046 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 TMEM235A6NFC5 223 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 NDUFS8O00217 210 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 ORM2P19652 201 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 CRHBPP24387 322 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 ACTBP60709 375 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 FGF12P61328 243 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 ACTG1P63261 375 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 GTF2BQ00403 316 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 FLOT2Q14254 428 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 FAM201AQ5SY85 155 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.2□□□□□ -2.22
CALD1-219ENST00000480638 TMEM75Q8N9X5 138 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 FNDC9Q8TBE3 224 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 CHST5Q9GZS9 411 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 MRM2Q9UI43 246 aaKnown RBP1.2□□□□□ -2.22
CALD1-219ENST00000480638 LINC00527Q9UJ94 153 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 SNX12Q9UMY4 172 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 UBR4Q5T4S7 5183 aa1.2□□□□□ -2.22
CALD1-219ENST00000480638 SLX4Q8IY92 1834 aa1.19□□□□□ -2.22
CALD1-219ENST00000480638 PCLOQ9Y6V0 5065 aa1.19□□□□□ -2.22
CALD1-219ENST00000480638 GRIFINA4D1Z8 144 aa1.19□□□□□ -2.22
CALD1-219ENST00000480638 LINC00862A6NCI5 91 aa1.19□□□□□ -2.22
CALD1-219ENST00000480638 SNAP29O95721 258 aa1.19□□□□□ -2.22
CALD1-219ENST00000480638 LDOC1O95751 146 aaPredicted RBP1.19□□□□□ -2.22
CALD1-219ENST00000480638 CDK2P24941 298 aa1.19□□□□□ -2.22
CALD1-219ENST00000480638 ZNF90Q03938 601 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms