RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 C10orf99Q6UWK7 81 aa17.21■□□□□ 0.35
COL9A3-211ENST00000477612 MOB1BQ7L9L4 216 aa17.21■□□□□ 0.35
COL9A3-211ENST00000477612 Q8N9W7 124 aa17.21■□□□□ 0.35
COL9A3-211ENST00000477612 OR8H1Q8NGG4 311 aa17.21■□□□□ 0.35
COL9A3-211ENST00000477612 FAM3DQ96BQ1 224 aa17.21■□□□□ 0.35
COL9A3-211ENST00000477612 ABHD14AQ9BUJ0 271 aa17.21■□□□□ 0.35
COL9A3-211ENST00000477612 YTHDF1Q9BYJ9 559 aaKnown RBP17.21■□□□□ 0.35
COL9A3-211ENST00000477612 ABCG5Q9H222 651 aa17.21■□□□□ 0.35
COL9A3-211ENST00000477612 LIN7CQ9NUP9 197 aaKnown RBP17.21■□□□□ 0.35
COL9A3-211ENST00000477612 ZNF736B4DX44 427 aaPredicted RBP17.2■□□□□ 0.34
COL9A3-211ENST00000477612 PPP1CCP36873 323 aaKnown RBP17.2■□□□□ 0.34
COL9A3-211ENST00000477612 KPRPQ5T749 579 aaPredicted RBP17.2■□□□□ 0.34
COL9A3-211ENST00000477612 UBE2UQ5VVX9 321 aa17.2■□□□□ 0.34
COL9A3-211ENST00000477612 WFDC9Q8NEX5 89 aa17.2■□□□□ 0.34
COL9A3-211ENST00000477612 CHPT1Q8WUD6 406 aa17.2■□□□□ 0.34
COL9A3-211ENST00000477612 ABRACLQ9P1F3 81 aa17.2■□□□□ 0.34
COL9A3-211ENST00000477612 NOTCH3Q9UM47 2321 aa17.2■□□□□ 0.34
COL9A3-211ENST00000477612 PRKDCP78527 4128 aaKnown RBP17.19■□□□□ 0.34
COL9A3-211ENST00000477612 TCRBV4S1A1TA0A5B7 111 aa17.19■□□□□ 0.34
COL9A3-211ENST00000477612 SHISA3A0PJX4 238 aa17.19■□□□□ 0.34
COL9A3-211ENST00000477612 PSMB11A5LHX3 300 aa17.19■□□□□ 0.34
COL9A3-211ENST00000477612 G3V4G9 280 aa17.19■□□□□ 0.34
COL9A3-211ENST00000477612 CLDN12P56749 244 aa17.19■□□□□ 0.34
COL9A3-211ENST00000477612 BEAN1Q3B7T3 259 aa17.19■□□□□ 0.34
COL9A3-211ENST00000477612 Q9H521 79 aa17.19■□□□□ 0.34
COL9A3-211ENST00000477612 STEAP1Q9UHE8 339 aa17.19■□□□□ 0.34
COL9A3-211ENST00000477612 AK3Q9UIJ7 227 aa17.19■□□□□ 0.34
COL9A3-211ENST00000477612 ITGB1BP1O14713 200 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 PDCD5O14737 125 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 VEGFCP49767 419 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 LSAMPQ13449 338 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 ZNF833PQ6ZTB9 187 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 SLC35E3Q7Z769 313 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 C1QL4Q86Z23 238 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 SPARTQ8N0X7 666 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 FAM71E2Q8N5Q1 922 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 OR56B1Q8NGI3 324 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 S1PR3Q99500 378 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 RAB22AQ9UL26 194 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 MGAT4AQ9UM21 535 aa17.18■□□□□ 0.34
COL9A3-211ENST00000477612 TMEM272A0A1B0GTI8 110 aa17.17■□□□□ 0.34
COL9A3-211ENST00000477612 NCBP2LA6PVI3 153 aaKnown RBP17.17■□□□□ 0.34
COL9A3-211ENST00000477612 FAM71F2Q6NXP2 309 aa17.17■□□□□ 0.34
COL9A3-211ENST00000477612 FOXRED2Q8IWF2 684 aa17.17■□□□□ 0.34
COL9A3-211ENST00000477612 COMMD1Q8N668 190 aa17.17■□□□□ 0.34
COL9A3-211ENST00000477612 ARHGAP5-AS1Q96IT6 56 aa17.17■□□□□ 0.34
COL9A3-211ENST00000477612 NOL4LQ96MY1 436 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-211ENST00000477612 NABP2Q9BQ15 211 aa17.17■□□□□ 0.34
COL9A3-211ENST00000477612 PECRQ9BY49 303 aa17.17■□□□□ 0.34
COL9A3-211ENST00000477612 LINC01548A6NM66 108 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 IFITM5A6NNB3 132 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 SERPINE3A8MV23 424 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 FGF9P31371 208 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-211ENST00000477612 F2RL1P55085 397 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 PLAC9Q5JTB6 97 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 HES5Q5TA89 166 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 ZNF329Q86UD4 541 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 STPG2Q8N412 459 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 OR2AK2Q8NG84 335 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 IFI27L2Q9H2X8 130 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 GHITMQ9H3K2 345 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 CHMP1AQ9HD42 196 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-211ENST00000477612 Q9N2K0 584 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 PIPOXQ9P0Z9 390 aa17.16■□□□□ 0.34
COL9A3-211ENST00000477612 DNAH3Q8TD57 4116 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 A0A1W2PRX2 142 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 AP4M1O00189 453 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 RAB3BP20337 219 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 GPR12P47775 334 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 HLA-DRB3P79483 266 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 IL1F10Q8WWZ1 152 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 FCGR1BQ92637 280 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 ZNF251Q9BRH9 671 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 HDHD3Q9BSH5 251 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-211ENST00000477612 C12orf4Q9NQ89 552 aa17.15■□□□□ 0.34
COL9A3-211ENST00000477612 SAA2-SAA4A0A096LPE2 208 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 SAA2P0DJI9 122 aaPredicted RBP17.14■□□□□ 0.33
COL9A3-211ENST00000477612 MYL9P24844 172 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 OR10A3P58181 314 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 SLC35B1P78383 322 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 PLA2G7Q13093 441 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 SETD6Q8TBK2 473 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 RASL11BQ9BPW5 248 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 CMSS1Q9BQ75 279 aaKnown RBP17.14■□□□□ 0.33
COL9A3-211ENST00000477612 AGMATQ9BSE5 352 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 ZFP57Q9NU63 452 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 SLC23A1Q9UHI7 598 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 ZNF580Q9UK33 172 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 TGP01266 2768 aa17.14■□□□□ 0.33
COL9A3-211ENST00000477612 RAB29O14966 203 aa17.13■□□□□ 0.33
COL9A3-211ENST00000477612 PF4V1P10720 104 aa17.13■□□□□ 0.33
COL9A3-211ENST00000477612 RAB6AP20340 208 aa17.13■□□□□ 0.33
COL9A3-211ENST00000477612 OR3A3P47888 321 aa17.13■□□□□ 0.33
COL9A3-211ENST00000477612 PTX4Q96A99 478 aa17.13■□□□□ 0.33
COL9A3-211ENST00000477612 MRPL20Q9BYC9 149 aaKnown RBP17.13■□□□□ 0.33
COL9A3-211ENST00000477612 TOLLIPQ9H0E2 274 aa17.13■□□□□ 0.33
COL9A3-211ENST00000477612 LINC00527Q9UJ94 153 aa17.13■□□□□ 0.33
COL9A3-211ENST00000477612 KCNK7Q9Y2U2 307 aa17.13■□□□□ 0.33
COL9A3-211ENST00000477612 SCTP09683 121 aa17.12■□□□□ 0.33
COL9A3-211ENST00000477612 ZBTB25P24278 435 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms