RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 PLEKHJ1Q9NW61 149 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 STEAP1Q9UHE8 339 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 DNAH3Q8TD57 4116 aa12.39□□□□□ -0.43
CLDN11-204ENST00000477531 LINC01548A6NM66 108 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 SLC22A1O15245 554 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 ARL6IP5O75915 188 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 VDAC1P21796 283 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 PSMA1P25786 263 aaKnown RBP12.38□□□□□ -0.43
CLDN11-204ENST00000477531 F2RL1P55085 397 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 GP2P55259 537 aaKnown RBP12.38□□□□□ -0.43
CLDN11-204ENST00000477531 LSAMPQ13449 338 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 GNMTQ14749 295 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 MMDQ15546 238 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 LY6G6FQ5SQ64 297 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 NRG4Q8WWG1 115 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 IL1F10Q8WWZ1 152 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 TM2D1Q9BX74 207 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 RIMS4Q9H426 269 aaPredicted RBP12.38□□□□□ -0.43
CLDN11-204ENST00000477531 ISYNA1Q9NPH2 558 aa12.38□□□□□ -0.43
CLDN11-204ENST00000477531 ZMAT5Q9UDW3 170 aaKnown RBP12.38□□□□□ -0.43
CLDN11-204ENST00000477531 TMEM14DPA8MWL7 114 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 ELANEP08246 267 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 OR5H8P0DN80 308 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 ARSBP15848 533 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 MYF6P23409 242 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 FOXE3Q13461 319 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 TPBGQ13641 420 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 IRF3Q14653 427 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 HMGN3Q15651 99 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 MOB1BQ7L9L4 216 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 FAM71E2Q8N5Q1 922 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 ZNF251Q9BRH9 671 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 DUSP21Q9H596 190 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 PIPOXQ9P0Z9 390 aa12.37□□□□□ -0.43
CLDN11-204ENST00000477531 ZNF107Q9UII5 783 aaPredicted RBP12.37□□□□□ -0.43
CLDN11-204ENST00000477531 HSPA13P48723 471 aa12.36□□□□□ -0.43
CLDN11-204ENST00000477531 MLLT11Q13015 90 aaPredicted RBP12.36□□□□□ -0.43
CLDN11-204ENST00000477531 UNC119Q13432 240 aa12.36□□□□□ -0.43
CLDN11-204ENST00000477531 ETV3LQ6ZN32 361 aa12.36□□□□□ -0.43
CLDN11-204ENST00000477531 C18orf65Q6ZTR6 163 aa12.36□□□□□ -0.43
CLDN11-204ENST00000477531 CHCHD6Q9BRQ6 235 aa12.36□□□□□ -0.43
CLDN11-204ENST00000477531 NICN1Q9BSH3 213 aa12.36□□□□□ -0.43
CLDN11-204ENST00000477531 MRPL20Q9BYC9 149 aaKnown RBP12.36□□□□□ -0.43
CLDN11-204ENST00000477531 KIAA1456Q9P272 454 aa12.36□□□□□ -0.43
CLDN11-204ENST00000477531 MGAT4AQ9UM21 535 aa12.36□□□□□ -0.43
CLDN11-204ENST00000477531 CCL24O00175 119 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 SLC17A2O00624 439 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 RPLP1P05386 114 aaKnown RBP12.35□□□□□ -0.43
CLDN11-204ENST00000477531 CD37P11049 281 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 SLC2A2P11168 524 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-204ENST00000477531 CPEP16870 476 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 PSMD7P51665 324 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 RAB25P57735 213 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 ACTBP60709 375 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 QRFPP83859 136 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 P2RY14Q15391 338 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 RAB11BQ15907 218 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 DEFB121Q5J5C9 76 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 FAM71F2Q6NXP2 309 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 ZNF833PQ6ZTB9 187 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 PRSS48Q7RTY5 328 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 C5orf24Q7Z6I8 188 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 ODF3L1Q8IXM7 274 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 SVOPQ8N4V2 548 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 NABP2Q9BQ15 211 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 HSPB9Q9BQS6 159 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 ANKRD60Q9BZ19 345 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 KCNK15Q9H427 330 aa12.35□□□□□ -0.43
CLDN11-204ENST00000477531 AK6Q9Y3D8 172 aaKnown RBP12.35□□□□□ -0.43
CLDN11-204ENST00000477531 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 RAB29O14966 203 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 HSPA12AO43301 675 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 NAPSAO96009 420 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 IGF1P05019 195 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
CLDN11-204ENST00000477531 CALRP27797 417 aaKnown RBP12.34□□□□□ -0.43
CLDN11-204ENST00000477531 HOXD3P31249 432 aaPredicted RBP12.34□□□□□ -0.43
CLDN11-204ENST00000477531 OR3A3P47888 321 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 CDX1P47902 265 aaPredicted RBP12.34□□□□□ -0.43
CLDN11-204ENST00000477531 RPS25P62851 125 aaKnown RBP12.34□□□□□ -0.43
CLDN11-204ENST00000477531 ZNF880Q6PDB4 577 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 TMEM65Q6PI78 240 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 TMEM91Q6ZNR0 172 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 OR8U1Q8NH10 309 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 CYYR1Q96J86 154 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 KCTD7Q96MP8 289 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 P2RX4Q99571 388 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 MGLLQ99685 303 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 LPAR5Q9H1C0 372 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 GHITMQ9H3K2 345 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 SLC23A1Q9UHI7 598 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 ZNF580Q9UK33 172 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 BLOC1S6Q9UL45 172 aa12.34□□□□□ -0.43
CLDN11-204ENST00000477531 NBR2O15453 112 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 SOCS1O15524 211 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 IGHG4P01861 327 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 CRHBPP24387 322 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 KRTAP10-11P60412 298 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
CLDN11-204ENST00000477531 KIR2DS1Q14954 304 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms