RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MOSPD3O75425 235 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 CXorf1O96002 111 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 C1QAP02745 245 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 MPDZO75970 2070 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 SNURFLB1AK76 121 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 GPR6P46095 362 aaPredicted RBP9.53□□□□□ -0.88
VAPB-204ENST00000475243 TMEM251Q8N6I4 163 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 WDR54Q9H977 334 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 LYRM2Q9NU23 88 aaPredicted RBP9.53□□□□□ -0.88
VAPB-204ENST00000475243 KLK13Q9UKR3 277 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 PATJQ8NI35 1801 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 PF4V1P10720 104 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 ELOBQ15370 118 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 GHITMQ9H3K2 345 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 PLAUP00749 431 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 APCSP02743 223 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 GUCA2BQ16661 112 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 RNF133Q8WVZ7 376 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 ZNF501Q96CX3 271 aaPredicted RBP9.53□□□□□ -0.88
VAPB-204ENST00000475243 ZNF764Q96H86 408 aaPredicted RBP9.53□□□□□ -0.88
VAPB-204ENST00000475243 C16orf92Q96LL3 132 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 ZNF714Q96N38 554 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 IGKV3D-11A0A0A0MRZ8 115 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 IGKV3-11P04433 115 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 PRDM14Q9GZV8 571 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 CBY1Q9Y3M2 126 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 ABCA1O95477 2261 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 FTH1P19P0C7X4 201 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 KLF9Q13886 244 aaPredicted RBP9.53□□□□□ -0.88
VAPB-204ENST00000475243 GBGT1Q8N5D6 347 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 ZNF552Q9H707 407 aaPredicted RBP9.53□□□□□ -0.88
VAPB-204ENST00000475243 PAM16Q9Y3D7 125 aa9.53□□□□□ -0.88
VAPB-204ENST00000475243 ANK1P16157 1881 aa9.52□□□□□ -0.88
VAPB-204ENST00000475243 IGHV1-45A0A0A0MS14 117 aa9.52□□□□□ -0.88
VAPB-204ENST00000475243 M0R3E3 92 aa9.52□□□□□ -0.88
VAPB-204ENST00000475243 SCTP09683 121 aa9.52□□□□□ -0.88
VAPB-204ENST00000475243 GCSHP23434 173 aa9.52□□□□□ -0.88
VAPB-204ENST00000475243 DLX1P56177 255 aa9.52□□□□□ -0.88
VAPB-204ENST00000475243 CD81P60033 236 aa9.52□□□□□ -0.88
VAPB-204ENST00000475243 TEX30Q5JUR7 227 aa9.52□□□□□ -0.88
VAPB-204ENST00000475243 AP4M1O00189 453 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 SMPD2O60906 423 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 SMUG1Q53HV7 270 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 DPPA3Q6W0C5 159 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 A0A1W2PP11 408 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 BTF3P20290 206 aaKnown RBP9.52□□□□□ -0.89
VAPB-204ENST00000475243 CD82P27701 267 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 TMEM91Q6ZNR0 172 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 A0A1B0GU03 582 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 HBZP02008 142 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 HERVK_113P61574 105 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 TBX15Q96SF7 602 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 PAXXQ9BUH6 204 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 IGKV1-8A0A0C4DH67 115 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 COX6B1P14854 86 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 RBM11P57052 281 aaKnown RBP9.52□□□□□ -0.89
VAPB-204ENST00000475243 KRTCAP3Q53RY4 240 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 ARL6IP6Q8N6S5 226 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 LEUTXA8MZ59 168 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 SUCLG1P53597 346 aaKnown RBP9.52□□□□□ -0.89
VAPB-204ENST00000475243 RPL24P83731 157 aaKnown RBP9.52□□□□□ -0.89
VAPB-204ENST00000475243 LEAP2Q969E1 77 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 KCNK7Q9Y2U2 307 aa9.52□□□□□ -0.89
VAPB-204ENST00000475243 PDE6DO43924 150 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 C19orf48Q6RUI8 117 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 VN1R17PQ8TDU5 208 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 GUCD1Q96NT3 240 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 HIGD1AQ9Y241 93 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 DHRS7CA6NNS2 312 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 CEACAM18A8MTB9 384 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 F12P00748 615 aaPredicted RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 FREM3P0C091 2139 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 GFRA1P56159 465 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 PNRC1Q12796 327 aaPredicted RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 OIT3Q8WWZ8 545 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 RSG1Q9BU20 258 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 MYO7BQ6PIF6 2116 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 H3BQ15 152 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 CLDN18P56856 261 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 ATP1A1-AS1Q5TC04 95 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 ITLN1Q8WWA0 313 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 ST6GALNAC2Q9UJ37 374 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 HSPB8Q9UJY1 196 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 CYB5R3P00387 301 aaPredicted RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 PGA4P0DJD7 388 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 PGA5P0DJD9 388 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 ID1P41134 155 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 CISD1Q9NZ45 108 aaKnown RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 TMEM218A2RU14 115 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 LMX1BO60663 402 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 ZNF735P0CB33 412 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 ERVFRD-1P60508 538 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 SURF2Q15527 256 aaPredicted RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 SNAI3Q3KNW1 292 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 TM4SF20Q53R12 229 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 PMS2CLQ68D20 193 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 HSD17B13Q7Z5P4 300 aaPredicted RBP9.51□□□□□ -0.89
VAPB-204ENST00000475243 OPN4Q9UHM6 478 aa9.51□□□□□ -0.89
VAPB-204ENST00000475243 H7C2G1 150 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms