RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MYL12BO14950 172 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 YPEL1O60688 119 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 OR5H8P0DN80 308 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 HTD2P86397 168 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 DCTN2Q13561 401 aaKnown RBP10.35□□□□□ -0.75
CPSF4-210ENST00000469897 LIN54Q6MZP7 749 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 C8orf59Q8N0T1 100 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-210ENST00000469897 ZNF491Q8N8L2 437 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 OR1N2Q8NGR9 330 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 NEDD4LQ96PU5 975 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 YPEL2Q96QA6 119 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 SULT4A1Q9BR01 284 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 ANKRD60Q9BZ19 345 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 OR51J1Q9H342 316 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 GNB4Q9HAV0 340 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 C8orf4Q9NR00 106 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 PLCXD1Q9NUJ7 323 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 JPT1Q9UK76 154 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 LRRC42Q9Y546 428 aa10.35□□□□□ -0.75
CPSF4-210ENST00000469897 IGHV7-81A0A0B4J1V7 117 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 ATP6V0E1O15342 81 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 NHLRC4P0CG21 123 aaPredicted RBP10.34□□□□□ -0.75
CPSF4-210ENST00000469897 HTR2CP28335 458 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 RAB9AP51151 201 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 FAM27D1Q5T7N8 215 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 C6orf201Q7Z4U5 140 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 ZNF554Q86TJ5 538 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 NKAIN3Q8N8D7 197 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 IL1F10Q8WWZ1 152 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 UBE2E2Q96LR5 201 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 ASCL2Q99929 193 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 CHCHD6Q9BRQ6 235 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 CST11Q9H112 138 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 PARP11Q9NR21 331 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 ERGIC3Q9Y282 383 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 DNAH9Q9NYC9 4486 aa10.34□□□□□ -0.75
CPSF4-210ENST00000469897 TRAV41A0A0B4J266 112 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 NBR2O15453 112 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 ST8SIA5O15466 376 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 RGS11O94810 467 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 IGLV1-40P01703 118 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 MAPK3P27361 379 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-210ENST00000469897 CHATP28329 748 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 GABPB1Q06547 395 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-210ENST00000469897 FHL3Q13643 280 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 RCN1Q15293 331 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 C5orf64Q2M2E5 130 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 C6orf141Q5SZD1 244 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 GLT8D1Q68CQ7 371 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 ZNF833PQ6ZTB9 187 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 CEACAM19Q7Z692 300 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 LRRTM1Q86UE6 522 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 NPBQ8NG41 125 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 OR2AK2Q8NG84 335 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 FBLIM1Q8WUP2 373 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 TMED9Q9BVK6 235 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 ABRACLQ9P1F3 81 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 ZNF580Q9UK33 172 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 VSIG4Q9Y279 399 aa10.33□□□□□ -0.76
CPSF4-210ENST00000469897 SAA2-SAA4A0A096LPE2 208 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 PTGES3LE9PB15 166 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 I3L521 148 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 FCN1O00602 326 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 UBBP0CG47 229 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-210ENST00000469897 CT45A6P0DMU7 189 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 CT45A5P0DMU8 189 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 CT45A7P0DMV0 189 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 SRMP19623 302 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 BLVRBP30043 206 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-210ENST00000469897 GNB1P62873 340 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 RPS27AP62979 156 aaKnown RBP10.32□□□□□ -0.76
CPSF4-210ENST00000469897 HMGN3Q15651 99 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 LY6G6FQ5SQ64 297 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 C1orf100Q5SVJ3 147 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 ASPHD1Q5U4P2 390 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 MS4A15Q8N5U1 240 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 SETD6Q8TBK2 473 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 MYOZ3Q8TDC0 251 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 THRSPQ92748 146 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 NICN1Q9BSH3 213 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 ALX4Q9H161 411 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-210ENST00000469897 KCNK15Q9H427 330 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 CHMP1AQ9HD42 196 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-210ENST00000469897 FKBP14Q9NWM8 211 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 KIAA1456Q9P272 454 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 STEAP1Q9UHE8 339 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 ZNF256Q9Y2P7 627 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-210ENST00000469897 NBEAL2Q6ZNJ1 2754 aa10.32□□□□□ -0.76
CPSF4-210ENST00000469897 LY86O95711 162 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 CDK1P06493 297 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 CX3CL1P78423 397 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 ZNF616Q08AN1 781 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 RPL39P5Q59GN2 51 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 RBM48Q5RL73 367 aaKnown RBP10.31□□□□□ -0.76
CPSF4-210ENST00000469897 OGFRL1Q5TC84 451 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-210ENST00000469897 GLDNQ6ZMI3 551 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-210ENST00000469897 MINDY2Q8NBR6 621 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 KCNG3Q8TAE7 436 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms