RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CHCHD6Q9BRQ6 235 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 ATP6V0E1O15342 81 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 RGS11O94810 467 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 ECI1P42126 302 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 FHL3Q13643 280 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 INSL4Q14641 139 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 RCN1Q15293 331 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 C6orf141Q5SZD1 244 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 TMEM65Q6PI78 240 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 MYOZ3Q8TDC0 251 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 GALMQ96C23 342 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 RITA1Q96K30 269 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 NEDD4LQ96PU5 975 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 SULT4A1Q9BR01 284 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 PARP11Q9NR21 331 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 PLCXD1Q9NUJ7 323 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 WSB1Q9Y6I7 421 aa14.94□□□□□ -0.02
COL9A3-206ENST00000466532 SAA2-SAA4A0A096LPE2 208 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 G3V318 75 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 NBR2O15453 112 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 HLA-DRB1P01911 266 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 UBBP0CG47 229 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 SAA2P0DJI9 122 aaPredicted RBP14.93□□□□□ -0.02
COL9A3-206ENST00000466532 VSIG8P0DPA2 414 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 CHATP28329 748 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 PPIFP30405 207 aaKnown RBP14.93□□□□□ -0.02
COL9A3-206ENST00000466532 OR3A3P47888 321 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 HMGN3Q15651 99 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 OR10K2Q6IF99 312 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 ZNF833PQ6ZTB9 187 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 OR2AK2Q8NG84 335 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 FBLIM1Q8WUP2 373 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 UBE2E2Q96LR5 201 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 FAAP24Q9BTP7 215 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 ANKRD60Q9BZ19 345 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 KLK15Q9H2R5 256 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 OR51J1Q9H342 316 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 SCOCQ9UIL1 159 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 ERGIC3Q9Y282 383 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 LSM4Q9Y4Z0 139 aaKnown RBP14.93□□□□□ -0.02
COL9A3-206ENST00000466532 LRRC42Q9Y546 428 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 TENM3Q9P273 2699 aa14.93□□□□□ -0.02
COL9A3-206ENST00000466532 IGHV7-81A0A0B4J1V7 117 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 NHLRC4P0CG21 123 aaPredicted RBP14.92□□□□□ -0.02
COL9A3-206ENST00000466532 GABPB1Q06547 395 aaPredicted RBP14.92□□□□□ -0.02
COL9A3-206ENST00000466532 ZNF260Q3ZCT1 412 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 ACSM3Q53FZ2 586 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 RBM48Q5RL73 367 aaKnown RBP14.92□□□□□ -0.02
COL9A3-206ENST00000466532 LY6G6FQ5SQ64 297 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 FAM27D1Q5T7N8 215 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 ZNF491Q8N8L2 437 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 TMEM59Q9BXS4 323 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 GNB4Q9HAV0 340 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 FKBP14Q9NWM8 211 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 ABRACLQ9P1F3 81 aa14.92□□□□□ -0.02
COL9A3-206ENST00000466532 RYR3Q15413 4870 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 SORL1Q92673 2214 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 TRAV41A0A0B4J266 112 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 IGLV1-40P01703 118 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 BLVRBP30043 206 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-206ENST00000466532 RPS27AP62979 156 aaKnown RBP14.91□□□□□ -0.02
COL9A3-206ENST00000466532 C5orf64Q2M2E5 130 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 GLT8D1Q68CQ7 371 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 LIN54Q6MZP7 749 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 C6orf201Q7Z4U5 140 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 LRRTM1Q86UE6 522 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 MS4A15Q8N5U1 240 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 OR1N2Q8NGR9 330 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 IL1F10Q8WWZ1 152 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 OR5B12Q96R08 314 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 IFI27L2Q9H2X8 130 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 KIAA1456Q9P272 454 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 STEAP1Q9UHE8 339 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 VSIG4Q9Y279 399 aa14.91□□□□□ -0.02
COL9A3-206ENST00000466532 I3L521 148 aa14.9□□□□□ -0.02
COL9A3-206ENST00000466532 OR8U8P0C7N1 319 aa14.9□□□□□ -0.02
COL9A3-206ENST00000466532 ZNF616Q08AN1 781 aa14.9□□□□□ -0.02
COL9A3-206ENST00000466532 KIAA0141Q14154 515 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-206ENST00000466532 C1orf100Q5SVJ3 147 aa14.9□□□□□ -0.02
COL9A3-206ENST00000466532 NPBQ8NG41 125 aa14.9□□□□□ -0.02
COL9A3-206ENST00000466532 NICN1Q9BSH3 213 aa14.9□□□□□ -0.02
COL9A3-206ENST00000466532 TMED9Q9BVK6 235 aa14.9□□□□□ -0.02
COL9A3-206ENST00000466532 MND1Q9BWT6 205 aa14.9□□□□□ -0.02
COL9A3-206ENST00000466532 KCNK15Q9H427 330 aa14.9□□□□□ -0.02
COL9A3-206ENST00000466532 CHMP1AQ9HD42 196 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-206ENST00000466532 ZNF256Q9Y2P7 627 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-206ENST00000466532 ST8SIA5O15466 376 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 NDUFA3O95167 84 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 HTR2CP28335 458 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 RAB9AP51151 201 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 GNB1P62873 340 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 RUNX1Q01196 453 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 UNC119Q13432 240 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 OGFRL1Q5TC84 451 aaPredicted RBP14.89□□□□□ -0.03
COL9A3-206ENST00000466532 ASPHD1Q5U4P2 390 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 FAM71F2Q6NXP2 309 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 FAM131AQ6UXB0 335 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 SVOPQ8N4V2 548 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 KCNG3Q8TAE7 436 aa14.89□□□□□ -0.03
COL9A3-206ENST00000466532 SETD6Q8TBK2 473 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms