RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 ZNF44P15621 663 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 AMY2BP19961 511 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 ZNF93P35789 620 aaPredicted RBP9.19□□□□□ -0.94
APTX-209ENST00000460940 GABRA2P47869 451 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 LUMP51884 338 aaPredicted RBP9.19□□□□□ -0.94
APTX-209ENST00000460940 RAB2AP61019 212 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 PAX2Q02962 417 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 C2orf68Q2NKX9 166 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 FAM120AOSQ5T036 256 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 FAM27D1Q5T7N8 215 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 SSX9Q7RTT3 188 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 ZNF546Q86UE3 836 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 FAM58AQ8N1B3 248 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 OR5D18Q8NGL1 313 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 LGALS14Q8TCE9 139 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 TNFAIP8L1Q8WVP5 186 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 RAB40AQ8WXH6 277 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 TNFSF18Q9UNG2 199 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 INSIG2Q9Y5U4 225 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 C2CD3Q4AC94 2353 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 IGKV1-12A0A0C4DH73 117 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 MEGF11A6BM72 1044 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 ANGPTL7O43827 346 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 ARL6IP5O75915 188 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 IGKV1D-12P01611 117 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 MT-ND4LP03901 98 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 LIPFP07098 398 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 UCHL1P09936 223 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 BCL3P20749 454 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 PRDX2P32119 198 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 RAB5CP51148 216 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 CHRFAM7AQ494W8 412 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 GLT8D1Q68CQ7 371 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 RAB12Q6IQ22 244 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 FAHD2BQ6P2I3 314 aaPredicted RBP9.18□□□□□ -0.94
APTX-209ENST00000460940 REC114Q7Z4M0 266 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 HIST1H2BAQ96A08 127 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 FAHD2AQ96GK7 314 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 FAM234AQ9H0X4 552 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 IL36GQ9NZH8 169 aa9.18□□□□□ -0.94
APTX-209ENST00000460940 SLC25A10Q9UBX3 287 aaPredicted RBP9.18□□□□□ -0.94
APTX-209ENST00000460940 ANK3Q12955 4377 aaKnown RBP9.17□□□□□ -0.94
APTX-209ENST00000460940 KIR2DS1A0A191URI9 304 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 A0A1B0GV90 55 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 A0A1W2PPK0 400 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 C22orf46C9J442 243 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 F8VVB4 439 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 F8VWA3 439 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 AP4M1O00189 453 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 TXNL1O43396 289 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 CHRM2P08172 466 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 OR8U8P0C7N1 319 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 NPBWR2P48146 333 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 ZNF146Q15072 292 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 C9orf152Q5JTZ5 239 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 LPCAT3Q6P1A2 487 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 DUX4L9Q6RFH8 374 aaPredicted RBP9.17□□□□□ -0.94
APTX-209ENST00000460940 ASCL4Q6XD76 172 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 RNF144BQ7Z419 303 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 BATF2Q8N1L9 274 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 CD177Q8N6Q3 437 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 OR52B4Q8NGK2 314 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 STOML3Q8TAV4 291 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 MALSU1Q96EH3 234 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 NUDT16L1Q9BRJ7 211 aaKnown RBP9.17□□□□□ -0.94
APTX-209ENST00000460940 GGACTQ9BVM4 153 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 SLITRK2Q9H156 845 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 TUBA4BQ9H853 241 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 UQCC1Q9NVA1 299 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 OR14J1Q9UGF5 321 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 WNK2Q9Y3S1 2297 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 ZFHX3Q15911 3703 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 TMEM272A0A1B0GTI8 110 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 HAND1O96004 215 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 MELTFP08582 738 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 PPIAL4GP0DN37 164 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 OR3A4PP47883 348 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 CD81P60033 236 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 FGF12P61328 243 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 PAX8Q06710 450 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 RSU1Q15404 277 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 SSX2Q16385 188 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 Q8NFD4 153 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 C8orf46Q8TAG6 207 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 C14orf144Q96I85 54 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 S100A13Q99584 98 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 C7orf69Q9H7B7 122 aa9.17□□□□□ -0.94
APTX-209ENST00000460940 RCC2Q9P258 522 aaKnown RBP9.17□□□□□ -0.94
APTX-209ENST00000460940 RPUSD1Q9UJJ7 312 aaKnown RBP9.17□□□□□ -0.94
APTX-209ENST00000460940 FCN3O75636 299 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 MAS1P04201 325 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 SFTPBP07988 381 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 SRMP19623 302 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 PPT1P50897 306 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 RIPPLY3P57055 190 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 PJVKQ0ZLH3 352 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 SCGB2A2Q13296 93 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 MAJINQ3KP22 176 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 ACOT7LQ6ZUV0 252 aa9.16□□□□□ -0.94
APTX-209ENST00000460940 C1QL2Q7Z5L3 287 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms