RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 PRR25Q96S07 402 aa21.16■□□□□ 0.98
USP42-204ENST00000451154 NABP2Q9BQ15 211 aa21.16■□□□□ 0.98
USP42-204ENST00000451154 SULT4A1Q9BR01 284 aa21.16■□□□□ 0.98
USP42-204ENST00000451154 FAAP24Q9BTP7 215 aa21.16■□□□□ 0.98
USP42-204ENST00000451154 CST11Q9H112 138 aa21.16■□□□□ 0.98
USP42-204ENST00000451154 SCOCQ9UIL1 159 aa21.16■□□□□ 0.98
USP42-204ENST00000451154 SEC14L6B5MCN3 397 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 YPEL1O60688 119 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 ECI1P42126 302 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 ACSM3Q53FZ2 586 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 C6orf141Q5SZD1 244 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 OR11H1Q8NG94 326 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 FBLIM1Q8WUP2 373 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 GALMQ96C23 342 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 NEDD4LQ96PU5 975 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 YPEL2Q96QA6 119 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 ZNF251Q9BRH9 671 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 ZNF580Q9UK33 172 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 ERGIC3Q9Y282 383 aa21.15■□□□□ 0.98
USP42-204ENST00000451154 OR5H8P0DN80 308 aa21.14■□□□□ 0.97
USP42-204ENST00000451154 CHATP28329 748 aa21.14■□□□□ 0.97
USP42-204ENST00000451154 PPIFP30405 207 aaKnown RBP21.14■□□□□ 0.97
USP42-204ENST00000451154 KIAA0141Q14154 515 aaPredicted RBP21.14■□□□□ 0.97
USP42-204ENST00000451154 TMEM65Q6PI78 240 aa21.14■□□□□ 0.97
USP42-204ENST00000451154 THRSPQ92748 146 aa21.14■□□□□ 0.97
USP42-204ENST00000451154 WWC2-AS2Q96NR7 200 aa21.14■□□□□ 0.97
USP42-204ENST00000451154 ANKRD60Q9BZ19 345 aa21.14■□□□□ 0.97
USP42-204ENST00000451154 LSM4Q9Y4Z0 139 aaKnown RBP21.14■□□□□ 0.97
USP42-204ENST00000451154 RGS11O94810 467 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 GABPB1Q06547 395 aaPredicted RBP21.13■□□□□ 0.97
USP42-204ENST00000451154 ZNF833PQ6ZTB9 187 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 C6orf201Q7Z4U5 140 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 LRRTM1Q86UE6 522 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 MYOZ3Q8TDC0 251 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 CHCHD6Q9BRQ6 235 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 OR51J1Q9H342 316 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 GNB4Q9HAV0 340 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 PARP11Q9NR21 331 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 FKBP14Q9NWM8 211 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 LRRC42Q9Y546 428 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 SORL1Q92673 2214 aa21.13■□□□□ 0.97
USP42-204ENST00000451154 IGHV7-81A0A0B4J1V7 117 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 ATP6V0E1O15342 81 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 UBBP0CG47 229 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 HTR2CP28335 458 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 FHL3Q13643 280 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 ZNF260Q3ZCT1 412 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 LY6G6FQ5SQ64 297 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 ZNF491Q8N8L2 437 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 IL1F10Q8WWZ1 152 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 OR5B12Q96R08 314 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 TMED9Q9BVK6 235 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 KCNK15Q9H427 330 aa21.12■□□□□ 0.97
USP42-204ENST00000451154 SAA2-SAA4A0A096LPE2 208 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 NBR2O15453 112 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 HLA-DRB1P01911 266 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 SAA2P0DJI9 122 aaPredicted RBP21.11■□□□□ 0.97
USP42-204ENST00000451154 RPS27AP62979 156 aaKnown RBP21.11■□□□□ 0.97
USP42-204ENST00000451154 HMGN3Q15651 99 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 C5orf64Q2M2E5 130 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 GLT8D1Q68CQ7 371 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 LIN54Q6MZP7 749 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 OR2AK2Q8NG84 335 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 OR1N2Q8NGR9 330 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 UBE2E2Q96LR5 201 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 VSIG4Q9Y279 399 aa21.11■□□□□ 0.97
USP42-204ENST00000451154 RYR3Q15413 4870 aa21.1■□□□□ 0.97
USP42-204ENST00000451154 I3L521 148 aa21.1■□□□□ 0.97
USP42-204ENST00000451154 IGLV1-40P01703 118 aa21.1■□□□□ 0.97
USP42-204ENST00000451154 RBM48Q5RL73 367 aaKnown RBP21.1■□□□□ 0.97
USP42-204ENST00000451154 C1orf100Q5SVJ3 147 aa21.1■□□□□ 0.97
USP42-204ENST00000451154 OGFRL1Q5TC84 451 aaPredicted RBP21.1■□□□□ 0.97
USP42-204ENST00000451154 MS4A15Q8N5U1 240 aa21.1■□□□□ 0.97
USP42-204ENST00000451154 NICN1Q9BSH3 213 aa21.1■□□□□ 0.97
USP42-204ENST00000451154 TMEM59Q9BXS4 323 aa21.1■□□□□ 0.97
USP42-204ENST00000451154 ABRACLQ9P1F3 81 aa21.1■□□□□ 0.97
USP42-204ENST00000451154 TRAV41A0A0B4J266 112 aa21.09■□□□□ 0.97
USP42-204ENST00000451154 PTGES3LE9PB15 166 aa21.09■□□□□ 0.97
USP42-204ENST00000451154 ST8SIA5O15466 376 aa21.09■□□□□ 0.97
USP42-204ENST00000451154 NHLRC4P0CG21 123 aaPredicted RBP21.09■□□□□ 0.97
USP42-204ENST00000451154 BLVRBP30043 206 aaPredicted RBP21.09■□□□□ 0.97
USP42-204ENST00000451154 CEACAM19Q7Z692 300 aa21.09■□□□□ 0.97
USP42-204ENST00000451154 NPBQ8NG41 125 aa21.09■□□□□ 0.97
USP42-204ENST00000451154 IFI27L2Q9H2X8 130 aa21.09■□□□□ 0.97
USP42-204ENST00000451154 CHMP1AQ9HD42 196 aaPredicted RBP21.09■□□□□ 0.97
USP42-204ENST00000451154 CDK1P06493 297 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 SRMP19623 302 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 RAB9AP51151 201 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 GNB1P62873 340 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 UNC119Q13432 240 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 ASPHD1Q5U4P2 390 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 KCNG3Q8TAE7 436 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 SETD6Q8TBK2 473 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 MND1Q9BWT6 205 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 KIAA1456Q9P272 454 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 STEAP1Q9UHE8 339 aa21.08■□□□□ 0.97
USP42-204ENST00000451154 RPL39P5Q59GN2 51 aa21.07■□□□□ 0.96
USP42-204ENST00000451154 FAM131AQ6UXB0 335 aa21.07■□□□□ 0.96
USP42-204ENST00000451154 MINDY2Q8NBR6 621 aa21.07■□□□□ 0.96
USP42-204ENST00000451154 PHYHIPQ92561 330 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms