RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 HMGN3Q15651 99 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 TBCEQ15813 527 aaPredicted RBP12.66□□□□□ -0.38
SGCE-208ENST00000450385 OXLD1Q5BKU9 147 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 FAM71E2Q8N5Q1 922 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 RNF152Q8N8N0 203 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 OR2AK2Q8NG84 335 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 SGCDQ92629 289 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 SULT4A1Q9BR01 284 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 FAAP24Q9BTP7 215 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 CENPOQ9BU64 300 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 MCRIP2Q9BUT9 160 aaKnown RBP12.66□□□□□ -0.38
SGCE-208ENST00000450385 PLGRKTQ9HBL7 147 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 RAB26Q9ULW5 256 aa12.66□□□□□ -0.38
SGCE-208ENST00000450385 A0A1W2PRX2 142 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 RAB29O14966 203 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 IGF1P05019 195 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 ELANEP08246 267 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 SOX6P35712 828 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 RPL23AP62750 156 aaKnown RBP12.65□□□□□ -0.38
SGCE-208ENST00000450385 LSAMPQ13449 338 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 FOXE3Q13461 319 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 NKAPLQ5M9Q1 402 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 C6orf201Q7Z4U5 140 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 OR10V1Q8NGI7 309 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 UBALD1Q8TB05 177 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 TMEM203Q969S6 136 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 CCDC90BQ9GZT6 254 aa12.65□□□□□ -0.38
SGCE-208ENST00000450385 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 TRAV1-2A0A0B4J238 106 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 SH2D7A6NKC9 451 aaPredicted RBP12.64□□□□□ -0.39
SGCE-208ENST00000450385 PDCD5O14737 125 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 SLC31A2O15432 143 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 MC5RP33032 325 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 MYCNOSP40205 109 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 RAB11BQ15907 218 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 KHDC1LQ5JSQ8 128 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 OR10K2Q6IF99 312 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 ZNF833PQ6ZTB9 187 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 ZNF367Q7RTV3 350 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 ZNF329Q86UD4 541 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 OR56B1Q8NGI3 324 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 EDARADDQ8WWZ3 215 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 PHF21AQ96BD5 680 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 RNF5Q99942 180 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 LPAR5Q9H1C0 372 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 V9GY05 133 aa12.64□□□□□ -0.39
SGCE-208ENST00000450385 DIRAS3O95661 229 aa12.63□□□□□ -0.39
SGCE-208ENST00000450385 ZBTB25P24278 435 aa12.63□□□□□ -0.39
SGCE-208ENST00000450385 CALRP27797 417 aaKnown RBP12.63□□□□□ -0.39
SGCE-208ENST00000450385 CDX1P47902 265 aaPredicted RBP12.63□□□□□ -0.39
SGCE-208ENST00000450385 THBS3P49746 956 aa12.63□□□□□ -0.39
SGCE-208ENST00000450385 P2RY14Q15391 338 aa12.63□□□□□ -0.39
SGCE-208ENST00000450385 CXorf66Q5JRM2 361 aaPredicted RBP12.63□□□□□ -0.39
SGCE-208ENST00000450385 HIST2H2BDQ6DRA6 164 aa12.63□□□□□ -0.39
SGCE-208ENST00000450385 ODF3L1Q8IXM7 274 aa12.63□□□□□ -0.39
SGCE-208ENST00000450385 OR52L2PQ8NGH6 319 aa12.63□□□□□ -0.39
SGCE-208ENST00000450385 NOL4LQ96MY1 436 aaPredicted RBP12.63□□□□□ -0.39
SGCE-208ENST00000450385 YTHDF1Q9BYJ9 559 aaKnown RBP12.63□□□□□ -0.39
SGCE-208ENST00000450385 CHMP1AQ9HD42 196 aaPredicted RBP12.63□□□□□ -0.39
SGCE-208ENST00000450385 SLC23A1Q9UHI7 598 aa12.63□□□□□ -0.39
SGCE-208ENST00000450385 RAB22AQ9UL26 194 aa12.63□□□□□ -0.39
SGCE-208ENST00000450385 IGHG4P01861 327 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 PPP1CCP36873 323 aaKnown RBP12.62□□□□□ -0.39
SGCE-208ENST00000450385 F2RL1P55085 397 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 GABARAPL2P60520 117 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 RPS25P62851 125 aaKnown RBP12.62□□□□□ -0.39
SGCE-208ENST00000450385 FABP5Q01469 135 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 CD200R1LQ6Q8B3 271 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 C10orf99Q6UWK7 81 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 LINC00482Q8N8I6 264 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 NPBQ8NG41 125 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 PTX4Q96A99 478 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 FAM3DQ96BQ1 224 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 NABP2Q9BQ15 211 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 ZNF251Q9BRH9 671 aa12.62□□□□□ -0.39
SGCE-208ENST00000450385 AK6Q9Y3D8 172 aaKnown RBP12.62□□□□□ -0.39
SGCE-208ENST00000450385 OR5H14A6NHG9 310 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 FOXI3A8MTJ6 420 aaPredicted RBP12.61□□□□□ -0.39
SGCE-208ENST00000450385 RBBP9O75884 186 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 VDAC1P21796 283 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 SERPINB10P48595 397 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 KIR2DS1Q14954 304 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 C2orf76Q3KRA6 126 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 FOXB2Q5VYV0 432 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 FAM53AQ6NSI3 398 aaPredicted RBP12.61□□□□□ -0.39
SGCE-208ENST00000450385 IL1F10Q8WWZ1 152 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 DPF1Q92782 380 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 NICN1Q9BSH3 213 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 Q9H521 79 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 C12orf4Q9NQ89 552 aa12.61□□□□□ -0.39
SGCE-208ENST00000450385 A0A0A6YYD4 124 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 TRDV1A0A1B0GX56 115 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 ZNF736B4DX44 427 aaPredicted RBP12.6□□□□□ -0.39
SGCE-208ENST00000450385 LDLRAD4O15165 306 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 SOCS1O15524 211 aa12.6□□□□□ -0.39
SGCE-208ENST00000450385 IGLL1P15814 213 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms