RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 FAM90A7PA6NKC0 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A22PA8MWA6 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A12PA8MX19 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A5PA8MXJ8 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A23PA8MXZ1 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 UBE2CO00762 179 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 LY86O95711 162 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 HAND1O96004 215 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A15PP0C7V4 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A13PP0C7W8 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A14PP0C7W9 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A24PP0C7X0 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 PGA5P0DJD9 388 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 HOXC12P31275 282 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 ERVK11-1P61568 191 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 CMTM1Q8IZ96 169 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 ZNF295-AS1Q8N0V1 137 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 TMEM252Q8N6L7 170 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 TMEM56-RWDD3S4R434 201 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 SPTBN4Q9H254 2564 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 KIAA1324LA8MWY0 1029 aaPredicted RBP12.47□□□□□ -0.41
SF1-211ENST00000448404 GLIPR1P48060 266 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 CAMLGP49069 296 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 CEBPGP53567 150 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 F2RL1P55085 397 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 STARD4Q96DR4 205 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 C5orf30Q96GV9 206 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 RARRES2Q99969 163 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 PLEKHA2Q9HB19 425 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 CACNG5Q9UF02 275 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 ARFGEF3Q5TH69 2177 aa12.46□□□□□ -0.41
SF1-211ENST00000448404 LRP5LA4QPB2 252 aa12.46□□□□□ -0.41
SF1-211ENST00000448404 GATCO43716 136 aaKnown RBP12.46□□□□□ -0.41
SF1-211ENST00000448404 HEXAP06865 529 aa12.46□□□□□ -0.41
SF1-211ENST00000448404 SERPINE2P07093 398 aa12.46□□□□□ -0.41
SF1-211ENST00000448404 NQO2P16083 231 aa12.46□□□□□ -0.41
SF1-211ENST00000448404 UCP1P25874 307 aa12.46□□□□□ -0.41
SF1-211ENST00000448404 GABRA2P47869 451 aa12.46□□□□□ -0.41
SF1-211ENST00000448404 UBAC2Q8NBM4 344 aa12.46□□□□□ -0.41
SF1-211ENST00000448404 PTPRBP23467 1997 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 IGHV1-18A0A0C4DH31 117 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 TAAR5O14804 337 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 SELLP14151 372 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 ATP6V0CP27449 155 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 PAX9P55771 341 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 MRPL49Q13405 166 aaKnown RBP12.46□□□□□ -0.42
SF1-211ENST00000448404 GUSBP1Q15486 140 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 FAM76BQ5HYJ3 339 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 ZNF497Q6ZNH5 498 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 PKIBQ9C010 78 aa12.46□□□□□ -0.42
SF1-211ENST00000448404 SEBOXQ9HB31 216 aaPredicted RBP12.46□□□□□ -0.42
SF1-211ENST00000448404 ASH1LQ9NR48 2969 aaKnown RBP12.45□□□□□ -0.42
SF1-211ENST00000448404 TSPAN15O95858 294 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 IGKV1-5P01602 117 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 FBP1P09467 338 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 EGR1P18146 543 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 VAMP2P63027 116 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 ZNF816Q0VGE8 651 aaPredicted RBP12.45□□□□□ -0.42
SF1-211ENST00000448404 OR2Z1Q8NG97 314 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 ISOC2Q96AB3 205 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 ABHD14BQ96IU4 210 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 EIF5A2Q9GZV4 153 aaKnown RBP12.45□□□□□ -0.42
SF1-211ENST00000448404 C11orf1Q9H5F2 150 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 DCHS2Q6V1P9 2916 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 C12orf77C9JDV5 145 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 KLK10O43240 276 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 CLN5O75503 358 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 RAC2P15153 192 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 P2RY1P47900 373 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
SF1-211ENST00000448404 TGIF2LYQ8IUE0 185 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 COQ2Q96H96 371 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 SPACA1Q9HBV2 294 aa12.45□□□□□ -0.42
SF1-211ENST00000448404 IGKV3-15P01624 115 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 RNF224P0DH78 156 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 VDAC1P21796 283 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 ZNF585BQ52M93 769 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 DRAM1Q8N682 238 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 HIST1H2BAQ96A08 127 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 PFDN5Q99471 154 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 FAM234AQ9H0X4 552 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 SMCO4Q9NRQ5 59 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 IGHV2OR16-5A0A0B4J2B6 119 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 IQCF6A8MYZ5 107 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 M0R1B8 84 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 METTL15P1P0C7V9 234 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 OR13C7P0DN81 318 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 ARL16Q0P5N6 197 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 IL13RA2Q14627 380 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 KRBOX4Q5JUW0 171 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 DUX4L9Q6RFH8 374 aaPredicted RBP12.44□□□□□ -0.42
SF1-211ENST00000448404 WDR82Q6UXN9 313 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 Q6ZS49 121 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 OR2G3Q8NGZ4 309 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 PLK3Q9H4B4 646 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 RPS10P5Q9NQ39 176 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 CACFD1Q9UGQ2 172 aa12.44□□□□□ -0.42
SF1-211ENST00000448404 PRR33A8MZF0 331 aa12.43□□□□□ -0.42
SF1-211ENST00000448404 KRASP01116 189 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms