RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SPTBP11277 2137 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 A0A1W2PP11 408 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 IGKV1D-16P01601 117 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 NGFRP08138 427 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 KLK2P20151 261 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 SOX8P57073 446 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 GABRA6Q16445 453 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 NHLRC3Q5JS37 347 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 INO80CQ6PI98 192 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-204ENST00000448183 GBGT1Q8N5D6 347 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 SF3B6Q9Y3B4 125 aaKnown RBP6.76□□□□□ -1.33
NEDD9-204ENST00000448183 FBLL1A6NHQ2 334 aaKnown RBP6.76□□□□□ -1.33
NEDD9-204ENST00000448183 CA2P00918 260 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 HLA-DQA1P01909 254 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 HKR1P10072 659 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 AREGP15514 252 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 PEBP1P30086 187 aaKnown RBP6.76□□□□□ -1.33
NEDD9-204ENST00000448183 MAGEA5P43359 124 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 OR4A47Q6IF82 309 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 C12orf54Q6X4T0 127 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 SSX8Q7RTT4 187 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 SFTPA2Q8IWL1 248 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 TMSB15BA0A087X1C1 80 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.76□□□□□ -1.33
NEDD9-204ENST00000448183 H0YL77 283 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 CD3EP07766 207 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 FGF12P61328 243 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 PLPPR5Q32ZL2 321 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 DEFB123Q8N688 67 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 OR5R1Q8NH85 324 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 ZNF721Q8TF20 911 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 RBM14Q96PK6 669 aaKnown RBP6.76□□□□□ -1.33
NEDD9-204ENST00000448183 GPR61Q9BZJ8 451 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 UQCR10Q9UDW1 63 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 RALYQ9UKM9 306 aaKnown RBP6.76□□□□□ -1.33
NEDD9-204ENST00000448183 ATG2BQ96BY7 2078 aa6.76□□□□□ -1.33
NEDD9-204ENST00000448183 XIRP1Q702N8 1843 aaKnown RBP6.76□□□□□ -1.33
NEDD9-204ENST00000448183 A0A1W2PRD5 423 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 A0A1W2PRF3 423 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 A0A1W2PRM7 423 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 SIAH2O43255 324 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 HYPMO75409 117 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 UPK3AO75631 287 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 CDX1P47902 265 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-204ENST00000448183 NMUP48645 174 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 H2BFSP57053 126 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 SLC35B1P78383 322 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 C3AR1Q16581 482 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 HIKESHIQ53FT3 197 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 FBXW9Q5XUX1 488 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 WDR31Q8NA23 367 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 HEXA-AS1Q9H8Q6 139 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 OR51B2Q9Y5P1 312 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 TRBV5-7A0A0A0MS05 114 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 GAGE10A6NGK3 116 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 H3BVH4 76 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 SPINT1O43278 529 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 ISG15P05161 165 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 CLDN18P56856 261 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 TAF15Q92804 592 aaKnown RBP eCLIP6.75□□□□□ -1.333e-6■□□□□ 9.1
NEDD9-204ENST00000448183 AMELYQ99218 206 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 TMUB1Q9BVT8 246 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 UNC13CQ8NB66 2214 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A27PA6NNH2 459 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 MPTX1A8MV57 137 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 M0R3E3 92 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 RAB29O14966 203 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 EIF4EBP2Q13542 120 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-204ENST00000448183 CXorf66Q5JRM2 361 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-204ENST00000448183 IBA57Q5T440 356 aaKnown RBP6.75□□□□□ -1.33
NEDD9-204ENST00000448183 OR8B3Q8NGG8 313 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 OR8B2Q96RD0 313 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 LY75O60449 1722 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 CDK2AP1O14519 115 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 PIN1P1O15428 100 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 MGPP08493 103 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 CCL4P13236 92 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 HINT1P49773 126 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-204ENST00000448183 SELENOTP62341 195 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 RELBQ01201 579 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 LRRC75BQ2VPJ9 315 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 CEACAM21Q3KPI0 293 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 SPATA45Q537H7 98 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 HES3Q5TGS1 186 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 PQLC2Q6ZP29 291 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 RBPMS2Q6ZRY4 209 aaKnown RBP6.75□□□□□ -1.33
NEDD9-204ENST00000448183 ASCL5Q7RTU5 278 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 APCDD1LQ8NCL9 501 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 AQP3Q92482 292 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 MARS2Q96GW9 593 aaKnown RBP6.75□□□□□ -1.33
NEDD9-204ENST00000448183 ZNF488Q96MN9 340 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 KCNE5Q9UJ90 142 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 HIGD1AQ9Y241 93 aa6.75□□□□□ -1.33
NEDD9-204ENST00000448183 CACNA1IQ9P0X4 2223 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A10PA6NDY2 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A18PA6NE21 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A16PA6NEW6 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A20PA6NIJ5 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A8PA6NJQ4 464 aa6.74□□□□□ -1.33
NEDD9-204ENST00000448183 FAM90A7PA6NKC0 464 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms