RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 LINC00052Q96N35 136 aa7.21□□□□□ -1.26
FXR1-203ENST00000445140 IDI2-AS1Q9NZ38 188 aa7.21□□□□□ -1.26
FXR1-203ENST00000445140 ASH1LQ9NR48 2969 aaKnown RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 FAM157AC9JC47 383 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 C12orf77C9JDV5 145 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 FABP7O15540 132 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 SPINT2O43291 252 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 RGS11O94810 467 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 LOXL3P58215 753 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 ERVFRD-1P60508 538 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 AESQ08117 197 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 ASAH1Q13510 395 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 SURF2Q15527 256 aaPredicted RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 TMEM249Q2WGJ8 235 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 C9orf139Q6ZV77 190 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 GLCCI1Q86VQ1 547 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 LHFPL1Q86WI0 220 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 H1FOOQ8IZA3 346 aaPredicted RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 Q8N402 240 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 BEST4Q8NFU0 473 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 OR13A1Q8NGR1 328 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 NUDCD2Q8WVJ2 157 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 GFOD1Q9NXC2 390 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 UTP20O75691 2785 aaKnown RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 MEIKINA0A087WXM9 373 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 UBE2QL1A1L167 161 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 ODF3BA8MYP8 253 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 ZFP36P26651 326 aaKnown RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 DGCR2P98153 550 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 HOXA4Q00056 320 aaPredicted RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 RELQ04864 619 aaPredicted RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 KRTAP1-1Q07627 177 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 LIN54Q6MZP7 749 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 BTNL3Q6UXE8 466 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 C19orf18Q8NEA5 215 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 THAP7Q9BT49 309 aaPredicted RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 METTL8Q9H825 291 aaKnown RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 FAM212BQ9NTI7 297 aaPredicted RBP7.2□□□□□ -1.26
FXR1-203ENST00000445140 NECAP2Q9NVZ3 263 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 TRAPPC2LQ9UL33 140 aa7.2□□□□□ -1.26
FXR1-203ENST00000445140 USF3Q68DE3 2245 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 OOSP1A8MZH6 123 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 AKAIN1P0CW23 69 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 NDUFB7P17568 137 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 FAUP35544 74 aaKnown RBP7.19□□□□□ -1.26
FXR1-203ENST00000445140 GDNFP39905 211 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 SNU13P55769 128 aaKnown RBP7.19□□□□□ -1.26
FXR1-203ENST00000445140 CYB5R2Q6BCY4 276 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 Q8N7P7 452 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 GALMQ96C23 342 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 HBZP02008 142 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 FABP1P07148 127 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 ZNF735P0CB33 412 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 IGHV1-8P0DP01 117 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 IL2RGP31785 369 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 HOXA1P49639 335 aaPredicted RBP7.19□□□□□ -1.26
FXR1-203ENST00000445140 MEOX2P50222 304 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 ANKRD39Q53RE8 183 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 BPIFB2Q8N4F0 458 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 NEK7Q8TDX7 302 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 EDARADDQ8WWZ3 215 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 TMEM186Q96B77 213 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 CREB3L1Q96BA8 519 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 KIRREL1Q96J84 757 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 TAF9BQ9HBM6 251 aa7.19□□□□□ -1.26
FXR1-203ENST00000445140 TBL2Q9Y4P3 447 aaKnown RBP7.19□□□□□ -1.26
FXR1-203ENST00000445140 NAV2Q8IVL1 2488 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 IGKV1-6A0A0C4DH72 117 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 RAB7AP51149 207 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 SSTP61278 116 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 SRSF2Q01130 221 aaKnown RBP7.18□□□□□ -1.26
FXR1-203ENST00000445140 SCN1BQ07699 218 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 HERPUD1Q15011 391 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 MIDNQ504T8 468 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 PYDC2Q56P42 97 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 MINOS1Q5TGZ0 78 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 IZUMO1Q8IYV9 350 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 BATF2Q8N1L9 274 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 WFDC11Q8NEX6 87 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 NANPQ8TBE9 248 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 CHMP1AQ9HD42 196 aaPredicted RBP7.18□□□□□ -1.26
FXR1-203ENST00000445140 MINOS1-NBL1R4GNA1 71 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.18□□□□□ -1.261e-7■■■■■ 33.3
FXR1-203ENST00000445140 ARID1AO14497 2285 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 ZNF736B4DX44 427 aaPredicted RBP7.18□□□□□ -1.26
FXR1-203ENST00000445140 ZNF205O95201 554 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 DEFA1P59665 94 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 DEFA3P59666 94 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 RND3P61587 244 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 SLC25A48Q6ZT89 311 aaKnown RBP7.18□□□□□ -1.26
FXR1-203ENST00000445140 OR4D10Q8NGI6 311 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 MOB3AQ96BX8 217 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 PRRT1Q99946 306 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 HDHD3Q9BSH5 251 aaPredicted RBP7.18□□□□□ -1.26
FXR1-203ENST00000445140 TMEM133Q9H2Q1 129 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 PRDM13Q9H4Q3 707 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 HEXA-AS1Q9H8Q6 139 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 GSN-AS1Q9NRJ2 163 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 COPZ2Q9P299 210 aa7.18□□□□□ -1.26
FXR1-203ENST00000445140 RPS10-NUDT3A0A1W2PQS6 291 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms