RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SNRPGP62308 76 aaKnown RBP10.95□□□□□ -0.66
HMGN1-208ENST00000443046 MRPL28Q13084 256 aaKnown RBP10.95□□□□□ -0.66
HMGN1-208ENST00000443046 GNMTQ14749 295 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 ACTBL2Q562R1 376 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 TRAT1Q6PIZ9 186 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 PRR18Q8N4B5 295 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 NEK7Q8TDX7 302 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 TMEM106AQ96A25 262 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 MS4A10Q96PG2 267 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 TMED9Q9BVK6 235 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 FBXL15Q9H469 300 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 TUBA4BQ9H853 241 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 TAF9BQ9HBM6 251 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 SPACA1Q9HBV2 294 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 RANGRFQ9HD47 186 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-208ENST00000443046 TMEM138Q9NPI0 162 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 MBNL3Q9NUK0 354 aaKnown RBP10.95□□□□□ -0.66
HMGN1-208ENST00000443046 PAK1IP1Q9NWT1 392 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-208ENST00000443046 SIGLEC8Q9NYZ4 499 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 GAB2Q9UQC2 676 aa10.95□□□□□ -0.66
HMGN1-208ENST00000443046 MCRIP1C9JLW8 97 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 GTF2F2P13984 249 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 ZP3P21754 424 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 MECP2P51608 486 aaKnown RBP10.94□□□□□ -0.66
HMGN1-208ENST00000443046 TPPP2P59282 170 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 HTD2P86397 168 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 MEDAGQ5VYS4 303 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 C5orf24Q7Z6I8 188 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 ZNF554Q86TJ5 538 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 PPP1R27Q86WC6 154 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 OR52L2PQ8NGH6 319 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 OR9G4Q8NGQ1 327 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 MRPL48Q96GC5 212 aaKnown RBP10.94□□□□□ -0.66
HMGN1-208ENST00000443046 MYCBPQ99417 103 aaPredicted RBP10.94□□□□□ -0.66
HMGN1-208ENST00000443046 FAM110AQ9BQ89 295 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 ETAA1Q9NY74 926 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 JPT1Q9UK76 154 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 RNF150Q9ULK6 438 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 CEPT1Q9Y6K0 416 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 A3GALT2U3KPV4 340 aa10.94□□□□□ -0.66
HMGN1-208ENST00000443046 SAA2-SAA4A0A096LPE2 208 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 YPEL1O60688 119 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 CA11O75493 328 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 FADS2O95864 444 aaKnown RBP10.93□□□□□ -0.66
HMGN1-208ENST00000443046 TFAP2AP05549 437 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 SAA2P0DJI9 122 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-208ENST00000443046 FASP25445 335 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 PPP1CCP36873 323 aaKnown RBP10.93□□□□□ -0.66
HMGN1-208ENST00000443046 SOX2P48431 317 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 DNAL1Q4LDG9 190 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 SLC22A6Q4U2R8 563 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 RNLSQ5VYX0 342 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 RAB12Q6IQ22 244 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 FAM71F2Q6NXP2 309 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 UNQ5815/PRO19632Q6UWF5 114 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 ZNF562Q6V9R5 426 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 AMIGO2Q86SJ2 522 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 GTSCR1Q86UQ5 136 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 LFNGQ8NES3 379 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 SLC7A6OSQ96CW6 309 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-208ENST00000443046 CYYR1Q96J86 154 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 YPEL2Q96QA6 119 aa10.93□□□□□ -0.66
HMGN1-208ENST00000443046 FAM103A1Q9BTL3 118 aaKnown RBP10.93□□□□□ -0.66
HMGN1-208ENST00000443046 SHISA3A0PJX4 238 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 IZUMO1RA6ND01 250 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
HMGN1-208ENST00000443046 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
HMGN1-208ENST00000443046 GYG2O15488 501 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 ATP8B1O43520 1251 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 GLAP06280 429 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 CSN3P07498 182 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
HMGN1-208ENST00000443046 SNRPBP14678 240 aaKnown RBP10.92□□□□□ -0.66
HMGN1-208ENST00000443046 MOGAT2Q3SYC2 334 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 DDI2Q5TDH0 399 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 LCN12Q6JVE5 192 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 FAM131AQ6UXB0 335 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 Q8N402 240 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 GPR148Q8TDV2 347 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 MRPS24Q96EL2 167 aaKnown RBP10.92□□□□□ -0.66
HMGN1-208ENST00000443046 RDH12Q96NR8 316 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 S100A13Q99584 98 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 IFI27L2Q9H2X8 130 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 IMPAD1Q9NX62 359 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 ERVK13-1Q9NX77 482 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 VPS13DQ5THJ4 4388 aa10.92□□□□□ -0.66
HMGN1-208ENST00000443046 TRGV3P03979 118 aa10.91□□□□□ -0.66
HMGN1-208ENST00000443046 CD2P06729 351 aa10.91□□□□□ -0.66
HMGN1-208ENST00000443046 CT45A6P0DMU7 189 aa10.91□□□□□ -0.66
HMGN1-208ENST00000443046 CT45A5P0DMU8 189 aa10.91□□□□□ -0.66
HMGN1-208ENST00000443046 CT45A7P0DMV0 189 aa10.91□□□□□ -0.66
HMGN1-208ENST00000443046 IGFBP3P17936 291 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-208ENST00000443046 GABRB1P18505 474 aa10.91□□□□□ -0.66
HMGN1-208ENST00000443046 BDKRB2P30411 391 aa10.91□□□□□ -0.66
HMGN1-208ENST00000443046 GTF2A1P52655 376 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-208ENST00000443046 GBX2P52951 348 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-208ENST00000443046 GPR176Q14439 515 aa10.91□□□□□ -0.66
HMGN1-208ENST00000443046 CCDC197Q8NCU1 140 aa10.91□□□□□ -0.66
HMGN1-208ENST00000443046 MRPL30Q8TCC3 161 aaKnown RBP10.91□□□□□ -0.66
HMGN1-208ENST00000443046 RNF5Q99942 180 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms