RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 DIMT1Q9UNQ2 313 aaKnown RBP6.08□□□□□ -1.44
VPS50-204ENST00000438395 ZNF256Q9Y2P7 627 aaPredicted RBP6.08□□□□□ -1.44
VPS50-204ENST00000438395 DNAH3Q8TD57 4116 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 TRAV41A0A0B4J266 112 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 PNMA8CA0A1B0GUJ8 204 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 UBE2QL1A1L167 161 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 FAM90A10PA6NDY2 464 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 FAM90A7PA6NKC0 464 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 LINC01548A6NM66 108 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 FAM90A23PA8MXZ1 464 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 ZNF736B4DX44 427 aaPredicted RBP6.07□□□□□ -1.44
VPS50-204ENST00000438395 MYL12BO14950 172 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 SLC31A2O15432 143 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 IGF1P05019 195 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 GLAP06280 429 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 FUT3P21217 361 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 CAPGP40121 348 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 ZNF137PP52743 207 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 ACTBP60709 375 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 GABPB1Q06547 395 aaPredicted RBP6.07□□□□□ -1.44
VPS50-204ENST00000438395 ZNF616Q08AN1 781 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 SMN1Q16637 294 aaKnown RBP6.07□□□□□ -1.44
VPS50-204ENST00000438395 CT45A1Q5HYN5 189 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 ZNF554Q86TJ5 538 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 FAM71E2Q8N5Q1 922 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 ZFP41Q8N8Y5 198 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 OR2AK2Q8NG84 335 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 OR11H1Q8NG94 326 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 OR1N2Q8NGR9 330 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 OR1L1Q8NH94 360 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 CT45A3Q8NHU0 189 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 ST6GALNAC6Q969X2 333 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 GALMQ96C23 342 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 ORAI1Q96D31 301 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 TMEM80Q96HE8 168 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 NEDD4LQ96PU5 975 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 OR5B12Q96R08 314 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 OR14A2Q96R54 314 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 HSPB9Q9BQS6 159 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 BANF2Q9H503 90 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 S100A14Q9HCY8 104 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 CHMP1AQ9HD42 196 aaPredicted RBP6.07□□□□□ -1.44
VPS50-204ENST00000438395 ISYNA1Q9NPH2 558 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 RCC2Q9P258 522 aaKnown RBP6.07□□□□□ -1.44
VPS50-204ENST00000438395 ZNF580Q9UK33 172 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 JPT1Q9UK76 154 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 VSIG4Q9Y279 399 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 WSB1Q9Y6I7 421 aa6.07□□□□□ -1.44
VPS50-204ENST00000438395 TRAV8-7A0A075B6U6 113 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 TRBV5-5A0A0J9YX44 114 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 A0A1W2PP11 408 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 A0A1W2PPK0 400 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 MAGEA13PA6NCF6 341 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 EFCAB10A6NFE3 127 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 RGS13O14921 159 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 ATP6V0E1O15342 81 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 NBR2O15453 112 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 OGG1O15527 345 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 PDCD6O75340 191 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 SAP30O75446 220 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 WBP4O75554 376 aaKnown RBP6.06□□□□□ -1.44
VPS50-204ENST00000438395 HLA-DRB1P01911 266 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 MAS1P04201 325 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 RCC1P18754 421 aaPredicted RBP6.06□□□□□ -1.44
VPS50-204ENST00000438395 PSMB8P28062 276 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 CD40LGP29965 261 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 PPP1CCP36873 323 aaKnown RBP6.06□□□□□ -1.44
VPS50-204ENST00000438395 F2RL1P55085 397 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 ECSCRQ19T08 205 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 TTC23Q5W5X9 447 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 DMKNQ6E0U4 476 aaPredicted RBP6.06□□□□□ -1.44
VPS50-204ENST00000438395 ZNF429Q86V71 674 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 CDH26Q8IXH8 852 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 ZNF439Q8NDP4 499 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 APH1BQ8WW43 257 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 IL1F10Q8WWZ1 152 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 FAM46BQ96A09 425 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 UBE2E2Q96LR5 201 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 SLC29A1Q99808 456 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 ASCL2Q99929 193 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 MRPL20Q9BYC9 149 aaKnown RBP6.06□□□□□ -1.44
VPS50-204ENST00000438395 OR51J1Q9H342 316 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 GHITMQ9H3K2 345 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 PLSCR3Q9NRY6 295 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 RNF150Q9ULK6 438 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 LRRC42Q9Y546 428 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 SMAD5-AS1Q9Y6J3 95 aa6.06□□□□□ -1.44
VPS50-204ENST00000438395 C3orf84H3BNL1 204 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 H7C2Y5 167 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 OVOL1O14753 267 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 GPX5O75715 221 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 UBBP0CG47 229 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 IGFBP3P17936 291 aaPredicted RBP6.05□□□□□ -1.44
VPS50-204ENST00000438395 BLVRBP30043 206 aaPredicted RBP6.05□□□□□ -1.44
VPS50-204ENST00000438395 CFHR3Q02985 330 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 TMEM267Q0VDI3 215 aaPredicted RBP6.05□□□□□ -1.44
VPS50-204ENST00000438395 ST3GAL4Q11206 333 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 FHL3Q13643 280 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 GNMTQ14749 295 aa6.05□□□□□ -1.44
VPS50-204ENST00000438395 C5orf64Q2M2E5 130 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms