RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 JPT1Q9UK76 154 aa11.85□□□□□ -0.51
UBXN4-203ENST00000416538 SAA2-SAA4A0A096LPE2 208 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 FOXI3A8MTJ6 420 aaPredicted RBP11.84□□□□□ -0.51
UBXN4-203ENST00000416538 AP4M1O00189 453 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 TXNL1O43396 289 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 NAPSAO96009 420 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 SAA2P0DJI9 122 aaPredicted RBP11.84□□□□□ -0.51
UBXN4-203ENST00000416538 SLC2A2P11168 524 aaPredicted RBP11.84□□□□□ -0.51
UBXN4-203ENST00000416538 MYF6P23409 242 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 EGFEM1PQ0D2K5 195 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 P2RY14Q15391 338 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 HSD17B12Q53GQ0 312 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 ZNF880Q6PDB4 577 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 FOXRED2Q8IWF2 684 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 RAX2Q96IS3 184 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 NABP2Q9BQ15 211 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 LPAR5Q9H1C0 372 aa11.84□□□□□ -0.51
UBXN4-203ENST00000416538 DNAH9Q9NYC9 4486 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 COL7A1Q02388 2944 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 NUDT19A8MXV4 375 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 UBBP0CG47 229 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 SRMP19623 302 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 MAP2K4P45985 399 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 TPBGQ13641 420 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 GLT8D1Q68CQ7 371 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 ZNF833PQ6ZTB9 187 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 ZNF554Q86TJ5 538 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 RNF152Q8N8N0 203 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 ZNF251Q9BRH9 671 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 ANKRD60Q9BZ19 345 aa11.83□□□□□ -0.52
UBXN4-203ENST00000416538 ST8SIA5O15466 376 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 SOCS1O15524 211 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 YPEL1O60688 119 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 BPNT1O95861 308 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 SNRPBP14678 240 aaKnown RBP11.82□□□□□ -0.52
UBXN4-203ENST00000416538 CRHBPP24387 322 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 SLC35B1P78383 322 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 HTD2P86397 168 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 PLA2G7Q13093 441 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 STEAP3Q658P3 488 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 ZNF695Q8IW36 515 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 OR51D1Q8NGF3 324 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 OR6M1Q8NGM8 313 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 UFD1Q92890 307 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 NEDD4LQ96PU5 975 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 YPEL2Q96QA6 119 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 RAB9BQ9NP90 201 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 ZFP57Q9NU63 452 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 SCN3BQ9NY72 215 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 KCNIP1Q9NZI2 227 aa11.82□□□□□ -0.52
UBXN4-203ENST00000416538 ZNF107Q9UII5 783 aaPredicted RBP11.82□□□□□ -0.52
UBXN4-203ENST00000416538 AK6Q9Y3D8 172 aaKnown RBP11.82□□□□□ -0.52
UBXN4-203ENST00000416538 SHISA3A0PJX4 238 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 SLC17A2O00624 439 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 HSMCR30P0CW71 290 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
UBXN4-203ENST00000416538 SOX6P35712 828 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 CLDN12P56749 244 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 ACTBP60709 375 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 NDPQ00604 133 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 FABP5Q01469 135 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 MMDQ15546 238 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 RPL39P5Q59GN2 51 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 LY6G6FQ5SQ64 297 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 TEX38Q6PEX7 206 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 COMMD1Q8N668 190 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 OR8H1Q8NGG4 311 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 KCNG3Q8TAE7 436 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 RASL11BQ9BPW5 248 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 OR1A1Q9P1Q5 309 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 AK3Q9UIJ7 227 aa11.81□□□□□ -0.52
UBXN4-203ENST00000416538 ATP6V0E1O15342 81 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 RGS10O43665 173 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 IGHG4P01861 327 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 CPEP16870 476 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 PSMB8P28062 276 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 MYCNOSP40205 109 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 TMEM50BP56557 158 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 MLLT11Q13015 90 aaPredicted RBP11.8□□□□□ -0.52
UBXN4-203ENST00000416538 FOXE3Q13461 319 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 SSX1Q16384 188 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 PNLIPRP3Q17RR3 467 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 FAM89BQ8N5H3 189 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 MYOZ3Q8TDC0 251 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 IL1F10Q8WWZ1 152 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 GALMQ96C23 342 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 KCTD7Q96MP8 289 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 ZNF580Q9UK33 172 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 TPRKBQ9Y3C4 175 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 FBXO7Q9Y3I1 522 aa11.8□□□□□ -0.52
UBXN4-203ENST00000416538 TRBV6-6A0A0A6YYG2 114 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 G3V318 75 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 CCL24O00175 119 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 LDLRAD4O15165 306 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 DUS4LO95620 317 aaKnown RBP11.79□□□□□ -0.52
UBXN4-203ENST00000416538 IGF1P05019 195 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 CXorf66Q5JRM2 361 aaPredicted RBP11.79□□□□□ -0.52
UBXN4-203ENST00000416538 ASPHD1Q5U4P2 390 aa11.79□□□□□ -0.52
UBXN4-203ENST00000416538 C11orf87Q6NUJ2 197 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms