RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 OR2B11Q5JQS5 317 aa12.45□□□□□ -0.42
LINC00475-202ENST00000416438 FAM90A2PQ658T7 463 aa12.45□□□□□ -0.42
LINC00475-202ENST00000416438 SPNS3Q6ZMD2 512 aa12.45□□□□□ -0.42
LINC00475-202ENST00000416438 EDARADDQ8WWZ3 215 aa12.45□□□□□ -0.42
LINC00475-202ENST00000416438 TCEAL7Q9BRU2 100 aa12.45□□□□□ -0.42
LINC00475-202ENST00000416438 TRGC2P03986 189 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 HOXA5P20719 270 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 BEND4Q6ZU67 534 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.44□□□□□ -0.42
LINC00475-202ENST00000416438 BCL2L2Q92843 193 aaPredicted RBP12.44□□□□□ -0.42
LINC00475-202ENST00000416438 PKIBQ9C010 78 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 A0A087WWC5 75 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 LNP1A1A4G5 178 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 TFF1P04155 84 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 GRPP07492 148 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 SLC25A6P12236 298 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 GLIPR1P48060 266 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 ATP1A1-AS1Q5TC04 95 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 LILRB2Q8N423 598 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 DRAM1Q8N682 238 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 OR4C12Q96R67 309 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 ZPBPQ9BS86 351 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 OR51M1Q9H341 326 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 TMPRSS5Q9H3S3 457 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 GP6Q9HCN6 339 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 ABI3Q9P2A4 366 aa12.44□□□□□ -0.42
LINC00475-202ENST00000416438 HMGB3O15347 200 aaKnown RBP12.43□□□□□ -0.42
LINC00475-202ENST00000416438 SP1P08047 785 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 RPS16P62249 146 aaKnown RBP12.43□□□□□ -0.42
LINC00475-202ENST00000416438 PDZD11Q5EBL8 140 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 GFI1BQ5VTD9 330 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 OR8G2PQ6IF36 304 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 CDPF1Q6NVV7 123 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 DPPA3Q6W0C5 159 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 DBX2Q6ZNG2 339 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 ZNF497Q6ZNH5 498 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 CXorf67Q86X51 503 aaPredicted RBP12.43□□□□□ -0.42
LINC00475-202ENST00000416438 FGFRL1Q8N441 504 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 LSM10Q969L4 123 aaKnown RBP12.43□□□□□ -0.42
LINC00475-202ENST00000416438 RCC1LQ96I51 464 aaKnown RBP12.43□□□□□ -0.42
LINC00475-202ENST00000416438 GGACTQ9BVM4 153 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 TOLLIPQ9H0E2 274 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 OPA3Q9H6K4 179 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 CD55P08174 381 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 BCL2P10415 239 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 FBXW9Q5XUX1 488 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 SLC35E3Q7Z769 313 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 ZNF610Q8N9Z0 462 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 WDYHV1Q96HA8 205 aa12.43□□□□□ -0.42
LINC00475-202ENST00000416438 TRAV1-1A0A0B4J248 108 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST1H2BKO60814 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 RAMP3O60896 148 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 NXPH2O95156 264 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST1H2BJP06899 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST1H2BOP23527 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST1H2BBP33778 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 IDH3GP51553 393 aaPredicted RBP12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST1H2BDP58876 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST1H2BCP62807 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 GTF3C1Q12789 2109 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 SLC10A1Q14973 349 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST2H2BEQ16778 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 LRRC75BQ2VPJ9 315 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 RNFT1Q5M7Z0 435 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST1H2BHQ93079 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST1H2BNQ99877 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 HIST1H2BMQ99879 126 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 SSX3Q99909 188 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 DDA1Q9BW61 102 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 RTL8AQ9BWD3 113 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 UBE2L5PA0A1B0GUS4 154 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 MDKP21741 143 aaPredicted RBP12.42□□□□□ -0.42
LINC00475-202ENST00000416438 C4orf17Q53FE4 359 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 CA5BP1Q8WTZ4 195 aa12.42□□□□□ -0.42
LINC00475-202ENST00000416438 RYDENQ9NUL5 291 aaKnown RBP12.42□□□□□ -0.42
LINC00475-202ENST00000416438 CISD1Q9NZ45 108 aaKnown RBP12.42□□□□□ -0.42
LINC00475-202ENST00000416438 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 NPIPB11E5RHQ5 1161 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 PSPNO60542 156 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 KRASP01116 189 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 IGKV1D-33P01593 117 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 IGKV1-33P01594 117 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 MDH2P40926 338 aaKnown RBP12.41□□□□□ -0.42
LINC00475-202ENST00000416438 CDX1P47902 265 aaPredicted RBP12.41□□□□□ -0.42
LINC00475-202ENST00000416438 ERVK11-1P61568 191 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 PYY3Q5JQD4 70 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 ZNF808Q8N4W9 903 aaPredicted RBP12.41□□□□□ -0.42
LINC00475-202ENST00000416438 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 WDR61Q9GZS3 305 aaKnown RBP12.41□□□□□ -0.42
LINC00475-202ENST00000416438 HIPK2Q9H2X6 1198 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 TMEM9BQ9NQ34 198 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 SPRR3Q9UBC9 169 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 LOC400499M0QZD8 3231 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 WNT9BO14905 357 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 CLDN1O95832 211 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 G6PCP35575 357 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 PPP1CBP62140 327 aa12.41□□□□□ -0.42
LINC00475-202ENST00000416438 ZNF816Q0VGE8 651 aaPredicted RBP12.41□□□□□ -0.42
LINC00475-202ENST00000416438 ZNF826PQ6ZT77 177 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms