RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TCRBV4S1A1TA0A5B7 111 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 IFITM5A6NNB3 132 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 SERPINE3A8MV23 424 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 HSPA12AO43301 675 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 OPN1MWP04001 364 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 OPN1MW2P0DN77 364 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 OPN1MW3P0DN78 364 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 GADD45AP24522 165 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 ZNF137PP52743 207 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 EBI3Q14213 229 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 LY6G6FQ5SQ64 297 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 ZNF773Q6PK81 442 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 C5orf24Q7Z6I8 188 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 C5orf56Q8N8D9 126 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 ARHGAP5-AS1Q96IT6 56 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 CYYR1Q96J86 154 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 PECRQ9BY49 303 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 C12orf4Q9NQ89 552 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 STUB1Q9UNE7 303 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 SSR3Q9UNL2 185 aa8.91□□□□□ -0.98
RFFL-204ENST00000414419 TRBV6-6A0A0A6YYG2 114 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 A0A1W2PRX2 142 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 PSMB11A5LHX3 300 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 METTL21EPA6NDL7 271 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 LANCL1O43813 399 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 CD3GP09693 182 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 ZBTB25P24278 435 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 FGF9P31371 208 aaPredicted RBP8.9□□□□□ -0.98
RFFL-204ENST00000414419 TMEM50BP56557 158 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 OR10A3P58181 314 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 SLC35B1P78383 322 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 DEFA6Q01524 100 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 KHDC1LQ5JSQ8 128 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 ZNF880Q6PDB4 577 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 SLC35E3Q7Z769 313 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 FOXRED2Q8IWF2 684 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 OR8H1Q8NGG4 311 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 WIPF2Q8TF74 440 aaPredicted RBP8.9□□□□□ -0.98
RFFL-204ENST00000414419 CHPT1Q8WUD6 406 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 RAB3CQ96E17 227 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 S1PR3Q99500 378 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 RASL11BQ9BPW5 248 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 HDHD3Q9BSH5 251 aaPredicted RBP8.9□□□□□ -0.98
RFFL-204ENST00000414419 TXNL4BQ9NX01 149 aaKnown RBP8.9□□□□□ -0.98
RFFL-204ENST00000414419 PIPOXQ9P0Z9 390 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 SLC23A1Q9UHI7 598 aa8.9□□□□□ -0.98
RFFL-204ENST00000414419 SHISA3A0PJX4 238 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 ZNF736B4DX44 427 aaPredicted RBP8.89□□□□□ -0.99
RFFL-204ENST00000414419 LDLRAD4O15165 306 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 PF4V1P10720 104 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 RAB6AP20340 208 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 CEACAM6P40199 344 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 HLA-DRB3P79483 266 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 CD83Q01151 205 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 LSAMPQ13449 338 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 TPRA1Q86W33 373 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 OR10R2Q8NGX6 335 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 EDARADDQ8WWZ3 215 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 GON7Q9BXV9 100 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 GHITMQ9H3K2 345 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 Q9N2K0 584 aa8.89□□□□□ -0.99
RFFL-204ENST00000414419 LIN7CQ9NUP9 197 aaKnown RBP8.89□□□□□ -0.99
RFFL-204ENST00000414419 TSSC4Q9Y5U2 329 aaPredicted RBP8.89□□□□□ -0.99
RFFL-204ENST00000414419 NOTCH1P46531 2555 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 A0A075B6Q4 140 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 SMIM30A4D0T7 59 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 FOXI3A8MTJ6 420 aaPredicted RBP8.88□□□□□ -0.99
RFFL-204ENST00000414419 NOTOA8MTQ0 251 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 RAB29O14966 203 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 ST8SIA5O15466 376 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 KCNAB3O43448 404 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 IGHG2P01859 326 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 NEDD8Q15843 81 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 KCTD21Q4G0X4 260 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 PLAC9Q5JTB6 97 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 ODF3L1Q8IXM7 274 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 Q8N6K4 173 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 PTX4Q96A99 478 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 KCTD7Q96MP8 289 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 ZNF251Q9BRH9 671 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 ATG5Q9H1Y0 275 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 ABCG5Q9H222 651 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 LINC00527Q9UJ94 153 aa8.88□□□□□ -0.99
RFFL-204ENST00000414419 NOTCH3Q9UM47 2321 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 SAA2-SAA4A0A096LPE2 208 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 A0A0B4J203 849 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 LOC100506127A0A0U1RQW1 187 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 TRDCB7Z8K6 153 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 AP4M1O00189 453 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 PF4P02776 101 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 SCTP09683 121 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 SAA2P0DJI9 122 aaPredicted RBP8.87□□□□□ -0.99
RFFL-204ENST00000414419 GNB3P16520 340 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 TALDO1P37837 337 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 OR3A3P47888 321 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 PLA2G7Q13093 441 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 ARFRP1Q13795 201 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 ARL6IP1Q15041 203 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 MMDQ15546 238 aa8.87□□□□□ -0.99
RFFL-204ENST00000414419 MOGAT2Q3SYC2 334 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms