RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 SYNGR1O43759 233 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 FBXO24O75426 580 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 RHBDL1O75783 438 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 LHBP01229 141 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 BCL3P20749 454 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 COL8A2P25067 703 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 FCGR2CP31995 323 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 EFNA4P52798 201 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 FXYD4P59646 89 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 FGF12P61328 243 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 ABCA11PQ4W5N1 156 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 WDR82Q6UXN9 313 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 MOGAT3Q86VF5 341 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 BATF2Q8N1L9 274 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 STPG2Q8N412 459 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.32□□□□□ -1.08
DDB1-202ENST00000414411 RTN4IP1Q8WWV3 396 aaPredicted RBP8.32□□□□□ -1.08
DDB1-202ENST00000414411 SLAMF9Q96A28 289 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 MOB3AQ96BX8 217 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 SLC2A9Q9NRM0 540 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 UFSP2Q9NUQ7 469 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 TAS2R3Q9NYW6 316 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 MTCH1Q9NZJ7 389 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 PCDHB10Q9UN67 800 aa8.32□□□□□ -1.08
DDB1-202ENST00000414411 IGHV1-69-2A0A0G2JMI3 117 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 LY6HO94772 140 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 IFNA21P01568 189 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 IGHV4-39P01824 125 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 OR5AC1P0C628 307 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 GLP1RP43220 463 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 UCP3P55916 312 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 ERVK11-1P61568 191 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 TMEM187Q14656 261 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 GGNBP1Q5YKI7 109 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 Q6ZS49 121 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 SLC38A6Q8IZM9 456 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 LRTM2Q8N967 370 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 OR10Z1Q8NGY1 313 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 KCNIP3Q9Y2W7 256 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 DEDDO75618 318 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 PGA5P0DJD9 388 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 HKR1P10072 659 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 DAOP14920 347 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 MKXQ8IYA7 352 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 GCSAMQ8N6F7 178 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 OR1S2Q8NGQ3 325 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 RNF141Q8WVD5 230 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 TMED6Q8WW62 240 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 RDH5Q92781 318 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 LURAP1Q96LR2 239 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 NRIP2Q9BQI9 281 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 SUCNR1Q9BXA5 334 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 MS4A7Q9GZW8 240 aaPredicted RBP8.31□□□□□ -1.08
DDB1-202ENST00000414411 TMEM106BQ9NUM4 274 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 TREM2Q9NZC2 230 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 RCC2Q9P258 522 aaKnown RBP8.31□□□□□ -1.08
DDB1-202ENST00000414411 POLDIP2Q9Y2S7 368 aa8.31□□□□□ -1.08
DDB1-202ENST00000414411 SRRM5B3KS81 715 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 LYNX1G3V0Z9 82 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.3□□□□□ -1.08
DDB1-202ENST00000414411 IFNL4K9M1U5 179 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 TAAR5O14804 337 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 NAPSAO96009 420 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 LYNX1P0DP58 116 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 AADACP22760 399 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 HERV-K104P61576 105 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 HOXA4Q00056 320 aaPredicted RBP8.3□□□□□ -1.08
DDB1-202ENST00000414411 SRSF7Q16629 238 aaKnown RBP eCLIP8.3□□□□□ -1.08
DDB1-202ENST00000414411 MPV17LQ2QL34 196 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 SP6Q3SY56 376 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 PHLDA2Q53GA4 152 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 UQCC3Q6UW78 93 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 FOXRED2Q8IWF2 684 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 PPP1R35Q8TAP8 253 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 CCL17Q92583 94 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 MARC2Q969Z3 335 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 MBD6Q96DN6 1003 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 HES4Q9HCC6 221 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 RNF7Q9UBF6 113 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 GLS2Q9UI32 602 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 AKAP9Q99996 3911 aa8.3□□□□□ -1.08
DDB1-202ENST00000414411 MED13LQ71F56 2210 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 RAB19A4D1S5 217 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 TRAPPC2LH3BP13 241 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 TMEM178BH3BS89 294 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 K7EPK0 472 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 PPYP01298 95 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 SMCO1Q147U7 214 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 HFEQ30201 348 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 IGSF11Q5DX21 431 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 PRR18Q8N4B5 295 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 FAM71E2Q8N5Q1 922 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 CCDC71LQ8N9Z2 235 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 GLYATL2Q8WU03 294 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 LRRC29Q8WV35 223 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 MSI2Q96DH6 328 aaKnown RBP8.29□□□□□ -1.08
DDB1-202ENST00000414411 C18orf12Q96KH6 178 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 ZNF488Q96MN9 340 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 RHOFQ9HBH0 211 aa8.29□□□□□ -1.08
DDB1-202ENST00000414411 BEX4Q9NWD9 120 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms