RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 ZNF695Q8IW36 515 aa13.24□□□□□ -0.29
COL6A2-205ENST00000413758 PLSCR3Q9NRY6 295 aa13.24□□□□□ -0.29
COL6A2-205ENST00000413758 PLEKHJ1Q9NW61 149 aa13.24□□□□□ -0.29
COL6A2-205ENST00000413758 STEAP1Q9UHE8 339 aa13.24□□□□□ -0.29
COL6A2-205ENST00000413758 RGS10O43665 173 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 UCHL1P09936 223 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 SLC2A2P11168 524 aaPredicted RBP13.23□□□□□ -0.29
COL6A2-205ENST00000413758 SLC6A1P30531 599 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 HTD2P86397 168 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 LCNL1Q6ZST4 164 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 OR2AK2Q8NG84 335 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 OR6M1Q8NGM8 313 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 NRG4Q8WWG1 115 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 DUX3Q96PT4 197 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 HSPB9Q9BQS6 159 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 ZNF251Q9BRH9 671 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 NICN1Q9BSH3 213 aa13.23□□□□□ -0.29
COL6A2-205ENST00000413758 MCRIP2Q9BUT9 160 aaKnown RBP13.23□□□□□ -0.29
COL6A2-205ENST00000413758 MRPL20Q9BYC9 149 aaKnown RBP13.23□□□□□ -0.29
COL6A2-205ENST00000413758 SLC22A1O15245 554 aa13.22□□□□□ -0.29
COL6A2-205ENST00000413758 YPEL1O60688 119 aa13.22□□□□□ -0.29
COL6A2-205ENST00000413758 BPNT1O95861 308 aa13.22□□□□□ -0.29
COL6A2-205ENST00000413758 RPLP1P05386 114 aaKnown RBP13.22□□□□□ -0.29
COL6A2-205ENST00000413758 RPS25P62851 125 aaKnown RBP13.22□□□□□ -0.29
COL6A2-205ENST00000413758 IRF3Q14653 427 aa13.22□□□□□ -0.29
COL6A2-205ENST00000413758 YPEL2Q96QA6 119 aa13.22□□□□□ -0.29
COL6A2-205ENST00000413758 URM1Q9BTM9 101 aaKnown RBP13.22□□□□□ -0.29
COL6A2-205ENST00000413758 ZNF107Q9UII5 783 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-205ENST00000413758 ARSBP15848 533 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 OR3A3P47888 321 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 ACTBP60709 375 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 UNC119Q13432 240 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 FOXE3Q13461 319 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 TRAM1Q15629 374 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 HMGN3Q15651 99 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 RAB11BQ15907 218 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 FAM71E2Q8N5Q1 922 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 TM2D1Q9BX74 207 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 VCX3BQ9H321 246 aa13.21□□□□□ -0.29
COL6A2-205ENST00000413758 AK6Q9Y3D8 172 aaKnown RBP13.21□□□□□ -0.29
COL6A2-205ENST00000413758 TMEM14DPA8MWL7 114 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 K7EIL1 84 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 CCL24O00175 119 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 ST8SIA5O15466 376 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 ARL6IP5O75915 188 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 ELANEP08246 267 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 KRTAP10-11P60412 298 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 MOB1BQ7L9L4 216 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 SVOPQ8N4V2 548 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 RAX2Q96IS3 184 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 NABP2Q9BQ15 211 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 KIAA1456Q9P272 454 aa13.2□□□□□ -0.3
COL6A2-205ENST00000413758 SAA2-SAA4A0A096LPE2 208 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 SOCS1O15524 211 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 SAA2P0DJI9 122 aaPredicted RBP13.19□□□□□ -0.3
COL6A2-205ENST00000413758 OR5H8P0DN80 308 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 PSMA1P25786 263 aaKnown RBP13.19□□□□□ -0.3
COL6A2-205ENST00000413758 MAP2K4P45985 399 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 TPBGQ13641 420 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 DEFB136Q30KP8 78 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 TMEM65Q6PI78 240 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 ODF3L1Q8IXM7 274 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 OR8U1Q8NH10 309 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 KCTD7Q96MP8 289 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 LPAR5Q9H1C0 372 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 RIMS4Q9H426 269 aaPredicted RBP13.19□□□□□ -0.3
COL6A2-205ENST00000413758 DUSP21Q9H596 190 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 ISYNA1Q9NPH2 558 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 PARP11Q9NR21 331 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 AK3Q9UIJ7 227 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 WSB1Q9Y6I7 421 aa13.19□□□□□ -0.3
COL6A2-205ENST00000413758 A0A0A6YYD4 124 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 WI2-2373I1.2A0A1W2PRP0 233 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 SLC17A2O00624 439 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 NBR2O15453 112 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 HSPA12AO43301 675 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 NAPSAO96009 420 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 CNTFRP26992 372 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 CALRP27797 417 aaKnown RBP13.18□□□□□ -0.3
COL6A2-205ENST00000413758 VEGFCP49767 419 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 QRFPP83859 136 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 MLLT11Q13015 90 aaPredicted RBP13.18□□□□□ -0.3
COL6A2-205ENST00000413758 PLGLAQ15195 96 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 LY6G6FQ5SQ64 297 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 TMEM91Q6ZNR0 172 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 ZNF833PQ6ZTB9 187 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 RITA1Q96K30 269 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 P2RX4Q99571 388 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 HDHD3Q9BSH5 251 aaPredicted RBP13.18□□□□□ -0.3
COL6A2-205ENST00000413758 ANKRD60Q9BZ19 345 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 PIPOXQ9P0Z9 390 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 SLC23A1Q9UHI7 598 aa13.18□□□□□ -0.3
COL6A2-205ENST00000413758 RAB29O14966 203 aa13.17□□□□□ -0.3
COL6A2-205ENST00000413758 IGHG4P01861 327 aa13.17□□□□□ -0.3
COL6A2-205ENST00000413758 CPEP16870 476 aa13.17□□□□□ -0.3
COL6A2-205ENST00000413758 CRHBPP24387 322 aa13.17□□□□□ -0.3
COL6A2-205ENST00000413758 CDX1P47902 265 aaPredicted RBP13.17□□□□□ -0.3
COL6A2-205ENST00000413758 CLDN12P56749 244 aa13.17□□□□□ -0.3
COL6A2-205ENST00000413758 RPL39P5Q59GN2 51 aa13.17□□□□□ -0.3
COL6A2-205ENST00000413758 FAM131AQ6UXB0 335 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms