RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 MGLLQ99685 303 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 FOXB1Q99853 325 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 OR10A2Q9H208 303 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 OR51I1Q9H343 314 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 SEBOXQ9HB31 216 aaPredicted RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 SPRR3Q9UBC9 169 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 PPIAL4EA0A075B759 164 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 PPIAL4DF5H284 164 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 M0QXV9 152 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 MPDU1O75352 247 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 TUSC2O75896 110 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ATP5LO75964 103 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 DBHP09172 617 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 PPIAL4FP0DN26 164 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 PRPH2P23942 346 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 IDH3AP50213 366 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 RPS20P60866 119 aaKnown RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 PAFAH1B2P68402 229 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 MLLT11Q13015 90 aaPredicted RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF385BQ569K4 471 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 UBE2NLQ5JXB2 153 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 TBPL2Q6SJ96 375 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 NFAM1Q8NET5 270 aaPredicted RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 GLMPQ8WWB7 406 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF75AQ96N20 296 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 MCHR1Q99705 422 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ABHD6Q9BV23 337 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 SRD5A3Q9H8P0 318 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ADGRL4Q9HBW9 690 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ASIC5Q9NY37 505 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 LAMTOR2Q9Y2Q5 125 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 PPIAL4AQ9Y536 164 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 CADP27708 2225 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 LOC105371242A0A075B767 164 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 H7C417 338 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 HMGN2P05204 90 aaKnown RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 EVX1P49640 407 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 SMN1Q16637 294 aaKnown RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ANKRD55Q3KP44 614 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 MFSD12Q6NUT3 480 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 RPL22L1Q6P5R6 122 aaKnown RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 STAC2Q6ZMT1 411 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 PRSS41Q7RTY9 318 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 CMC1Q7Z7K0 106 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 APCDD1LQ8NCL9 501 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 TWIST2Q8WVJ9 160 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 MRPS24Q96EL2 167 aaKnown RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ALKBH3Q96Q83 286 aaPredicted RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 RTL8AQ9BWD3 113 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 SIRPDQ9H106 197 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 BANF2Q9H503 90 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ELL3Q9HB65 397 aaPredicted RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 SH2D2AQ9NP31 389 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 OR5AC2Q9NZP5 309 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 IGKV3D-11A0A0A0MRZ8 115 aa6.96□□□□□ -1.29
LIMS1-203ENST00000393310 KIR2DS1A0A191URI9 304 aa6.96□□□□□ -1.29
LIMS1-203ENST00000393310 KIR2DS1Q14954 304 aa6.96□□□□□ -1.29
LIMS1-203ENST00000393310 KHDC3LQ587J8 217 aa6.96□□□□□ -1.29
LIMS1-203ENST00000393310 C9orf40Q8IXQ3 194 aa6.96□□□□□ -1.29
LIMS1-203ENST00000393310 OR9G4Q8NGQ1 327 aa6.96□□□□□ -1.29
LIMS1-203ENST00000393310 OR13C8Q8NGS7 320 aa6.96□□□□□ -1.29
LIMS1-203ENST00000393310 LYPD6BQ8NI32 183 aa6.96□□□□□ -1.29
LIMS1-203ENST00000393310 KCNIP2Q9NS61 270 aa6.96□□□□□ -1.29
LIMS1-203ENST00000393310 PCDH15Q96QU1 1955 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 MDC1Q14676 2089 aaKnown RBP6.96□□□□□ -1.3
LIMS1-203ENST00000393310 HLA-DPB1P04440 258 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 FUT3P21217 361 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 ASPHD2Q6ICH7 369 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 DHRS11Q6UWP2 260 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 OR5AN1Q8NGI8 311 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 TM4SF18Q96CE8 201 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 NEURL3Q96EH8 262 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 WIPI2Q9Y4P8 454 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 A0A1W2PPK0 400 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 GAGE12BA1L429 117 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 ITGA5P08648 1049 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 UBE2MP61081 183 aaKnown RBP6.96□□□□□ -1.3
LIMS1-203ENST00000393310 HSD52Q0P140 79 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 TNXAQ16473 311 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 DPPA3Q6W0C5 159 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 ZNF295-AS1Q8N0V1 137 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 PRR14Q9BWN1 585 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 RNF167Q9H6Y7 350 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 TUBA4BQ9H853 241 aa6.96□□□□□ -1.3
LIMS1-203ENST00000393310 POLQO75417 2590 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 A0A1W2PPV9 198 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 OR2W5A6NFC9 320 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 SH2D7A6NKC9 451 aaPredicted RBP6.95□□□□□ -1.3
LIMS1-203ENST00000393310 J3KTA2 159 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 FCN3O75636 299 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 SOD3P08294 240 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 GABRB3P28472 473 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 HRH1P35367 487 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 RPL13AP40429 203 aaKnown RBP6.95□□□□□ -1.3
LIMS1-203ENST00000393310 TP53I3Q53FA7 332 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 AWAT1Q58HT5 328 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 FAM219AQ8IW50 185 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 RPS4Y2Q8TD47 263 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 CSF3RQ99062 836 aa6.95□□□□□ -1.3
LIMS1-203ENST00000393310 PLXND1Q9Y4D7 1925 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms