RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 RAI1Q7Z5J4 1906 aaPredicted RBP17.76■□□□□ 0.43
SPHK1-202ENST00000392496 SMG1Q96Q15 3661 aaKnown RBP17.76■□□□□ 0.43
SPHK1-202ENST00000392496 TRAV38-1A0A0B4J264 116 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 TMEM178BH3BS89 294 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 SIGLEC5O15389 551 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 GYPAP02724 150 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 RLN2P04090 185 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 LOXP28300 417 aaPredicted RBP17.76■□□□□ 0.43
SPHK1-202ENST00000392496 EDDM3BP56851 147 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 SMCO1Q147U7 214 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 ZNF672Q499Z4 452 aaPredicted RBP17.76■□□□□ 0.43
SPHK1-202ENST00000392496 C4orf17Q53FE4 359 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 FAM216AQ8WUB2 273 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 CCL13Q99616 98 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 SPIN2AQ99865 258 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 SPIN2BQ9BPZ2 258 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 TMEM204Q9BSN7 226 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 RAB9BQ9NP90 201 aa17.76■□□□□ 0.43
SPHK1-202ENST00000392496 DEFB108AA8MXU0 73 aa17.75■□□□□ 0.43
SPHK1-202ENST00000392496 SELLP14151 372 aa17.75■□□□□ 0.43
SPHK1-202ENST00000392496 PPP1CCP36873 323 aaKnown RBP17.75■□□□□ 0.43
SPHK1-202ENST00000392496 SWI5Q1ZZU3 235 aa17.75■□□□□ 0.43
SPHK1-202ENST00000392496 ZNF808Q8N4W9 903 aaPredicted RBP17.75■□□□□ 0.43
SPHK1-202ENST00000392496 OR51H1Q8NH63 302 aa17.75■□□□□ 0.43
SPHK1-202ENST00000392496 RFESDQ8TAC1 157 aa17.75■□□□□ 0.43
SPHK1-202ENST00000392496 RRNAD1Q96FB5 475 aaKnown RBP17.75■□□□□ 0.43
SPHK1-202ENST00000392496 TMEM106BQ9NUM4 274 aa17.75■□□□□ 0.43
SPHK1-202ENST00000392496 JPT1Q9UK76 154 aa17.75■□□□□ 0.43
SPHK1-202ENST00000392496 PPIAL4EA0A075B759 164 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 NKX6-3A6NJ46 265 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 RNF212BA8MTL3 300 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 PPIAL4DF5H284 164 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 F2RL2O00254 374 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 DEDDO75618 318 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 PPIAL4FP0DN26 164 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 CGB3P0DN86 165 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 CGB7P0DN87 165 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 VDAC1P21796 283 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 UBA52P62987 128 aaKnown RBP17.74■□□□□ 0.43
SPHK1-202ENST00000392496 AQP10Q96PS8 301 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 PLEKHF2Q9H8W4 249 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 LIN7CQ9NUP9 197 aaKnown RBP17.74■□□□□ 0.43
SPHK1-202ENST00000392496 PPIAL4AQ9Y536 164 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 CLEC18AA5D8T8 446 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 MBPP02686 304 aaPredicted RBP17.74■□□□□ 0.43
SPHK1-202ENST00000392496 SERPINE2P07093 398 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 GNLYP22749 145 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 OR8H3Q8N146 312 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 CLEC18CQ8NCF0 446 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 OR4D5Q8NGN0 318 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 ARPC5LQ9BPX5 153 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 OR2D2Q9H210 308 aa17.74■□□□□ 0.43
SPHK1-202ENST00000392496 HCFC1P51610 2035 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 TANC2Q9HCD6 1990 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 A0A1B0GW55 424 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 DUX4L2P0CJ85 424 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 DUX4L3P0CJ86 424 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 DUX4L4P0CJ87 422 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 DUX4L5P0CJ88 424 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 DUX4L6P0CJ89 424 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 DUX4L7P0CJ90 424 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 NMSQ5H8A3 153 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 FAM53AQ6NSI3 398 aaPredicted RBP17.73■□□□□ 0.43
SPHK1-202ENST00000392496 DUX4L9Q6RFH8 374 aaPredicted RBP17.73■□□□□ 0.43
SPHK1-202ENST00000392496 MUC15Q8N387 334 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 OR52M1Q8NGK5 317 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 EDARADDQ8WWZ3 215 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 CALYQ9NYX4 217 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 DUX4Q9UBX2 424 aa17.73■□□□□ 0.43
SPHK1-202ENST00000392496 RALYQ9UKM9 306 aaKnown RBP17.73■□□□□ 0.43
SPHK1-202ENST00000392496 LSM5Q9Y4Y9 91 aaKnown RBP17.73■□□□□ 0.43
SPHK1-202ENST00000392496 IGHV3-43A0A0B4J1X8 118 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 K7EPK0 472 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 YPEL1O60688 119 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 SCGB1D2O95969 90 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 IGHV3-43DP0DP04 118 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 FAM219AQ8IW50 185 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 FOXRED2Q8IWF2 684 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 FAM71E2Q8N5Q1 922 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 FAM216BQ8N7L0 139 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 CCL17Q92583 94 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 YPEL2Q96QA6 119 aa17.72■□□□□ 0.43
SPHK1-202ENST00000392496 KCNAB3O43448 404 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 AGAP20933 346 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 EIF4EBP1Q13541 118 aaPredicted RBP17.71■□□□□ 0.43
SPHK1-202ENST00000392496 CLLU1Q5K131 121 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 SCARB1Q8WTV0 552 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 ST8SIA2Q92186 375 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 RNF150Q9ULK6 438 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 CFAP46Q8IYW2 2715 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 TRGV10A0A0A0MS01 117 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 MEX3AA1L020 520 aaKnown RBP17.71■□□□□ 0.43
SPHK1-202ENST00000392496 MSGN1A6NI15 193 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 E5RGE8 158 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 ST8SIA3O43173 380 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 ADAM20O43506 726 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 CLDN14O95500 239 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 MORN2Q502X0 79 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 ARFGEF3Q5TH69 2177 aa17.71■□□□□ 0.43
SPHK1-202ENST00000392496 CORO2AQ92828 525 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 225.7 ms