RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 FGF12P61328 243 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 FAM168AQ92567 244 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 MOB4Q9Y3A3 225 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 NKX2-6A6NCS4 301 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 RBFOX3A6NFN3 312 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 NPIPB6E9PJ23 425 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 ADAP1O75689 374 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 GCSHP23434 173 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 MFAP4P55083 255 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 ZNF826PQ6ZT77 177 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 OR10G8Q8NGN5 311 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 PILRAQ9UKJ1 303 aa11.24□□□□□ -0.61
NLRC3-202ENST00000359128 CTDSPLO15194 276 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 CEBPDP49716 269 aaPredicted RBP11.23□□□□□ -0.61
NLRC3-202ENST00000359128 RELBQ01201 579 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 CTF1Q16619 201 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 TIMP4Q99727 224 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 DOCK5Q9H7D0 1870 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 MESP2Q0VG99 397 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 MGAT2Q10469 447 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 HCP5Q6MZN7 132 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 OVCH2Q7RTZ1 564 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 COL5A3P25940 1745 aaPredicted RBP11.23□□□□□ -0.61
NLRC3-202ENST00000359128 RGS13O14921 159 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 ZNF207O43670 478 aaKnown RBP11.23□□□□□ -0.61
NLRC3-202ENST00000359128 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
NLRC3-202ENST00000359128 ABHD14BQ96IU4 210 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 SCNM1Q9BWG6 230 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 SMCHD1A6NHR9 2005 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 A0A1W2PQM1 296 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 ACSF3Q4G176 576 aaPredicted RBP11.23□□□□□ -0.61
NLRC3-202ENST00000359128 TEX261Q6UWH6 196 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 MMD2Q8IY49 270 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 HDHD3Q9BSH5 251 aaPredicted RBP11.23□□□□□ -0.61
NLRC3-202ENST00000359128 NXF2Q9GZY0 626 aaKnown RBP11.23□□□□□ -0.61
NLRC3-202ENST00000359128 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 SLC35E3Q7Z769 313 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 GPA33Q99795 319 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 CLEC7AQ9BXN2 247 aa11.23□□□□□ -0.61
NLRC3-202ENST00000359128 TLNRD1Q9H1K6 362 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 TRIP12Q14669 1992 aaPredicted RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 ZNF883P0CG24 379 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 WDR25Q64LD2 544 aaPredicted RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 HSD17B13Q7Z5P4 300 aaPredicted RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 RALYQ9UKM9 306 aaKnown RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 COL11A2P13942 1736 aaPredicted RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 IGKV3D-11A0A0A0MRZ8 115 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 ALX3O95076 343 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 IGKV3-11P04433 115 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 PPOXP50336 477 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 IQCJQ1A5X6 159 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 TNS1Q9HBL0 1735 aaKnown RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 TO15178 435 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 PNKDQ8N490 385 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 MRPL24Q96A35 216 aaKnown RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 TMEM140Q9NV12 185 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 TRAV30A0A087WSZ9 112 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 CRHP06850 196 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 MAS1LP35410 378 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 RPL8P62917 257 aaKnown RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 LCN2P80188 198 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 HERPUD1Q15011 391 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 ADAD2Q8NCV1 583 aaKnown RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 ABHD17AQ96GS6 310 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 VPS25Q9BRG1 176 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 SSBP3Q9BWW4 388 aaPredicted RBP11.22□□□□□ -0.61
NLRC3-202ENST00000359128 CALYQ9NYX4 217 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 MIA3Q5JRA6 1907 aa11.22□□□□□ -0.61
NLRC3-202ENST00000359128 ACAA1P09110 424 aaPredicted RBP11.21□□□□□ -0.61
NLRC3-202ENST00000359128 MVDP53602 400 aa11.21□□□□□ -0.61
NLRC3-202ENST00000359128 EWSR1Q01844 656 aaKnown RBP eCLIP11.21□□□□□ -0.61
NLRC3-202ENST00000359128 LDLRAD3Q86YD5 345 aa11.21□□□□□ -0.61
NLRC3-202ENST00000359128 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.61
NLRC3-202ENST00000359128 ZNF418Q8TF45 676 aaPredicted RBP11.21□□□□□ -0.61
NLRC3-202ENST00000359128 NEU4Q8WWR8 484 aaPredicted RBP11.21□□□□□ -0.61
NLRC3-202ENST00000359128 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.61
NLRC3-202ENST00000359128 M0R3E3 92 aa11.21□□□□□ -0.61
NLRC3-202ENST00000359128 ISLRO14498 428 aa11.21□□□□□ -0.61
NLRC3-202ENST00000359128 ASAH2BP0C7U1 165 aa11.21□□□□□ -0.61
NLRC3-202ENST00000359128 SNRPD3P62318 126 aaKnown RBP11.21□□□□□ -0.61
NLRC3-202ENST00000359128 PSG9Q00887 426 aa11.21□□□□□ -0.61
NLRC3-202ENST00000359128 POLR2AP24928 1970 aaKnown RBP11.21□□□□□ -0.61
NLRC3-202ENST00000359128 DXOO77932 396 aaKnown RBP11.21□□□□□ -0.61
NLRC3-202ENST00000359128 FCGR3AP08637 254 aa11.21□□□□□ -0.61
NLRC3-202ENST00000359128 TCTEX1D1Q8N7M0 179 aa11.21□□□□□ -0.61
NLRC3-202ENST00000359128 PTX4Q96A99 478 aa11.21□□□□□ -0.61
NLRC3-202ENST00000359128 A0A0B4J293 547 aa11.21□□□□□ -0.62
NLRC3-202ENST00000359128 VSIG8P0DPA2 414 aa11.21□□□□□ -0.62
NLRC3-202ENST00000359128 TSPOP30536 169 aa11.21□□□□□ -0.62
NLRC3-202ENST00000359128 LYZL2Q7Z4W2 148 aa11.21□□□□□ -0.62
NLRC3-202ENST00000359128 ST6GALNAC2Q9UJ37 374 aa11.21□□□□□ -0.62
NLRC3-202ENST00000359128 HSPB8Q9UJY1 196 aa11.21□□□□□ -0.62
NLRC3-202ENST00000359128 ARID1BQ8NFD5 2236 aaPredicted RBP11.21□□□□□ -0.62
NLRC3-202ENST00000359128 CROCCQ5TZA2 2017 aa11.21□□□□□ -0.62
NLRC3-202ENST00000359128 HIST1H1BP16401 226 aaKnown RBP11.21□□□□□ -0.62
NLRC3-202ENST00000359128 ZNF107Q9UII5 783 aaPredicted RBP11.21□□□□□ -0.62
NLRC3-202ENST00000359128 VAX2Q9UIW0 290 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms