RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZNF25P17030 456 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 HMGA2P52926 109 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 WNT4P56705 351 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 HIST1H3AP68431 136 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 ZNF92Q03936 586 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 FHL1Q13642 323 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 RSPO1Q2MKA7 263 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 DNM1P34Q6PK57 102 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 CRIP3Q6Q6R5 217 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 HIST2H3AQ71DI3 136 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 DPY19L4Q7Z388 723 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 RNF144BQ7Z419 303 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 TMEM219Q86XT9 240 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 TOMM5Q8N4H5 51 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 UBAC2Q8NBM4 344 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 TMEM104Q8NE00 496 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 OR56B1Q8NGI3 324 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 OR13C8Q8NGS7 320 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 OR2AJ1Q8NGZ0 328 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 NEK7Q8TDX7 302 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 PRRC1Q96M27 445 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 TSSK2Q96PF2 358 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 ACTR3CQ9C0K3 210 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 TLNRD1Q9H1K6 362 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 UQCC1Q9NVA1 299 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 ZNF391Q9UJN7 358 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 TMEM269A0A1B0GVZ9 245 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 M0R1W7 72 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 MFNGO00587 321 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 CREBL2O60519 120 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 ZFPL1O95159 310 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 DIRAS3O95661 229 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 CD3GP09693 182 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 SLC25A4P12235 298 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 NQO2P16083 231 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 PSMA6P60900 246 aaKnown RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 PJVKQ0ZLH3 352 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 KLF9Q13886 244 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 DOC2BQ14184 412 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 RSU1Q15404 277 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 SNAI3Q3KNW1 292 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 DMRTC1Q5HYR2 192 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 KHDC1LQ5JSQ8 128 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 OR52W1Q6IF63 320 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 FAM185AQ8N0U4 392 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 FOXRED1Q96CU9 486 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 SAT2Q96F10 170 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 FNDC11Q9BVV2 318 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 PRSS22Q9GZN4 317 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 C20orf85Q9H1P6 137 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 MEGF9Q9H1U4 602 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 ELL3Q9HB65 397 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 FGF20Q9NP95 211 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 MRPL15Q9P015 296 aaKnown RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 COMMD3Q9UBI1 195 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 SLC25A10Q9UBX3 287 aaPredicted RBP9.05□□□□□ -0.96
RTN3-204ENST00000354497 A4GNTQ9UNA3 340 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 V9GYS6 101 aa9.05□□□□□ -0.96
RTN3-204ENST00000354497 A0A1W2PPE3 182 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 PRR23D1E9PI22 279 aaPredicted RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 M0R135 149 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 CDC42EP2O14613 210 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 BCL2L11O43521 198 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 ENTPD6O75354 484 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 DUS4LO95620 317 aaKnown RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 HLA-DQA2P01906 255 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 CHRM2P08172 466 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 PRR23D2P0DMB1 279 aaPredicted RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 COX7A1P24310 79 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 NAA10P41227 235 aaPredicted RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 LGALS4P56470 323 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 RPS20P60866 119 aaKnown RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 MRPS10P82664 201 aaKnown RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 BDH1Q02338 343 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 TSPAN31Q12999 210 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 JOSD1Q15040 202 aaPredicted RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 CNN3Q15417 329 aaKnown RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 USF2Q15853 346 aaPredicted RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 KRTAP27-1Q3LI81 207 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 GLYATL3Q5SZD4 288 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 HCP5Q6MZN7 132 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 SLC18B1Q6NT16 456 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 PTCHD4Q6ZW05 846 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 ACBD7Q8N6N7 88 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 OR5AU1Q8NGC0 362 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 OR5D13Q8NGL4 314 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 OR4C15Q8NGM1 316 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 C8orf46Q8TAG6 207 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 HPSE2Q8WWQ2 592 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 SPTSSAQ969W0 71 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 ZNF799Q96GE5 643 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 OR14A2Q96R54 314 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 NRIP2Q9BQI9 281 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 MFFQ9GZY8 342 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 SRA1Q9HD15 236 aaKnown RBP9.04□□□□□ -0.96
RTN3-204ENST00000354497 IER3IP1Q9Y5U9 82 aa9.04□□□□□ -0.96
RTN3-204ENST00000354497 SACSQ9NZJ4 4579 aa9.03□□□□□ -0.96
RTN3-204ENST00000354497 TCRBV4S1A1TA0A5B7 111 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms