RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ABCG5Q9H222 651 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 PLGRKTQ9HBL7 147 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 LIN7CQ9NUP9 197 aaKnown RBP15.93■□□□□ 0.14
SYNE2-201ENST00000341472 PLEKHJ1Q9NW61 149 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 ABRACLQ9P1F3 81 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 JPT1Q9UK76 154 aa15.93■□□□□ 0.14
SYNE2-201ENST00000341472 AK6Q9Y3D8 172 aaKnown RBP15.93■□□□□ 0.14
SYNE2-201ENST00000341472 LINC01548A6NM66 108 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 YPEL1O60688 119 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 PPP1CCP36873 323 aaKnown RBP15.92■□□□□ 0.14
SYNE2-201ENST00000341472 GPR12P47775 334 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 GNMTQ14749 295 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 P2RY14Q15391 338 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 LY6G6FQ5SQ64 297 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 UBE2UQ5VVX9 321 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 COMMD1Q8N668 190 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 YPEL2Q96QA6 119 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 S1PR3Q99500 378 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 URM1Q9BTM9 101 aaKnown RBP15.92■□□□□ 0.14
SYNE2-201ENST00000341472 CHMP1AQ9HD42 196 aaPredicted RBP15.92■□□□□ 0.14
SYNE2-201ENST00000341472 ZFP57Q9NU63 452 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 NECAP2Q9NVZ3 263 aa15.92■□□□□ 0.14
SYNE2-201ENST00000341472 SLC17A2O00624 439 aa15.91■□□□□ 0.14
SYNE2-201ENST00000341472 SMIM18P0DKX4 95 aa15.91■□□□□ 0.14
SYNE2-201ENST00000341472 IGLL1P15814 213 aa15.91■□□□□ 0.14
SYNE2-201ENST00000341472 ARSBP15848 533 aa15.91■□□□□ 0.14
SYNE2-201ENST00000341472 STPG2Q8N412 459 aa15.91■□□□□ 0.14
SYNE2-201ENST00000341472 NICN1Q9BSH3 213 aa15.91■□□□□ 0.14
SYNE2-201ENST00000341472 ABHD14AQ9BUJ0 271 aa15.91■□□□□ 0.14
SYNE2-201ENST00000341472 RIMS4Q9H426 269 aaPredicted RBP15.91■□□□□ 0.14
SYNE2-201ENST00000341472 KCNK15Q9H427 330 aa15.91■□□□□ 0.14
SYNE2-201ENST00000341472 AP4M1O00189 453 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 RANBP1P43487 201 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 PSMD7P51665 324 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 RPL23AP62750 156 aaKnown RBP15.9■□□□□ 0.14
SYNE2-201ENST00000341472 HMGN3Q15651 99 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 RAB11BQ15907 218 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 OR2W3Q7Z3T1 314 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 SETD6Q8TBK2 473 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 PHF21AQ96BD5 680 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 GFI1Q99684 422 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 GON7Q9BXV9 100 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 LPAR5Q9H1C0 372 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 STEAP1Q9UHE8 339 aa15.9■□□□□ 0.14
SYNE2-201ENST00000341472 A0A0A6YYD4 124 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 SOCS1O15524 211 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 NAPSAO96009 420 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 CALRP27797 417 aaKnown RBP15.89■□□□□ 0.13
SYNE2-201ENST00000341472 F2RL1P55085 397 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 FABP5Q01469 135 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 NEDD8Q15843 81 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 PNLIPRP3Q17RR3 467 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 FAM89BQ8N5H3 189 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 IL1F10Q8WWZ1 152 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 PLXNB1O43157 2135 aa15.89■□□□□ 0.13
SYNE2-201ENST00000341472 LSAMPQ13449 338 aa15.88■□□□□ 0.13
SYNE2-201ENST00000341472 FOXB2Q5VYV0 432 aa15.88■□□□□ 0.13
SYNE2-201ENST00000341472 ZNF880Q6PDB4 577 aa15.88■□□□□ 0.13
SYNE2-201ENST00000341472 TEX38Q6PEX7 206 aa15.88■□□□□ 0.13
SYNE2-201ENST00000341472 ODF3L1Q8IXM7 274 aa15.88■□□□□ 0.13
SYNE2-201ENST00000341472 OR2AK2Q8NG84 335 aa15.88■□□□□ 0.13
SYNE2-201ENST00000341472 OR51D1Q8NGF3 324 aa15.88■□□□□ 0.13
SYNE2-201ENST00000341472 RBMXL1Q96E39 390 aaKnown RBP15.88■□□□□ 0.13
SYNE2-201ENST00000341472 NUDT19A8MXV4 375 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 PSMB9P28065 219 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 SLC6A1P30531 599 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 SOX6P35712 828 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 OR3A3P47888 321 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 C2orf76Q3KRA6 126 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 MOB1BQ7L9L4 216 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 FAM3DQ96BQ1 224 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 RCC1LQ96I51 464 aaKnown RBP15.87■□□□□ 0.13
SYNE2-201ENST00000341472 NABP2Q9BQ15 211 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 AK3Q9UIJ7 227 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 HSF4Q9ULV5 492 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 V9GY05 133 aa15.87■□□□□ 0.13
SYNE2-201ENST00000341472 TRBV6-6A0A0A6YYG2 114 aa15.86■□□□□ 0.13
SYNE2-201ENST00000341472 DUS4LO95620 317 aaKnown RBP15.86■□□□□ 0.13
SYNE2-201ENST00000341472 TFAP2AP05549 437 aa15.86■□□□□ 0.13
SYNE2-201ENST00000341472 RPL5P46777 297 aaKnown RBP15.86■□□□□ 0.13
SYNE2-201ENST00000341472 TMEM50BP56557 158 aa15.86■□□□□ 0.13
SYNE2-201ENST00000341472 CLDN12P56749 244 aa15.86■□□□□ 0.13
SYNE2-201ENST00000341472 Q6ZPA2 131 aa15.86■□□□□ 0.13
SYNE2-201ENST00000341472 ZNF833PQ6ZTB9 187 aa15.86■□□□□ 0.13
SYNE2-201ENST00000341472 FAM71E2Q8N5Q1 922 aa15.86■□□□□ 0.13
SYNE2-201ENST00000341472 MRPL20Q9BYC9 149 aaKnown RBP15.86■□□□□ 0.13
SYNE2-201ENST00000341472 MYCNOSP40205 109 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 THBS3P49746 956 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 VEGFCP49767 419 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 ACTBP60709 375 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 C18orf65Q6ZTR6 163 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 C8orf86Q6ZUL3 223 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 ZNF695Q8IW36 515 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 MRPL41Q8IXM3 137 aaKnown RBP15.85■□□□□ 0.13
SYNE2-201ENST00000341472 LINC00482Q8N8I6 264 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 MRAPQ8TCY5 172 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 RITA1Q96K30 269 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 ZNF251Q9BRH9 671 aa15.85■□□□□ 0.13
SYNE2-201ENST00000341472 AURKAIP1Q9NWT8 199 aaPredicted RBP15.85■□□□□ 0.13
SYNE2-201ENST00000341472 PIPOXQ9P0Z9 390 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms