RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 HSPB7Q9UBY9 170 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 STARD10Q9Y365 291 aa11.31□□□□□ -0.6
USP47-202ENST00000339865 CCL21O00585 134 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 HIST1H1AQ02539 215 aaPredicted RBP11.3□□□□□ -0.6
USP47-202ENST00000339865 SFTA2Q6UW10 78 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 OR2V1Q8NHB1 315 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 PHOSPHO2Q8TCD6 241 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 GNRHR2Q96P88 292 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 OPN4Q9UHM6 478 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 TRGV5A0A0B4J1U4 118 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 UPK1AO00322 258 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
USP47-202ENST00000339865 RTL10Q7L3V2 364 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 ARHGAP32A7KAX9 2087 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 A0A1W2PRX2 142 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 ANKRD20A5PA0PJZ0 165 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 H0Y8X5 98 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 GAPTQ8N292 157 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 C9orf62Q8N4C0 152 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 C18orf15Q96N68 181 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 DDB2Q92466 427 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 HIGD1AQ9Y241 93 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 C19orf67A6NJJ6 358 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 MRPS11P82912 194 aaKnown RBP11.3□□□□□ -0.6
USP47-202ENST00000339865 RARRES2Q99969 163 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 PARP11Q9NR21 331 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 SRIP30626 198 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 SURF2Q15527 256 aaPredicted RBP11.3□□□□□ -0.6
USP47-202ENST00000339865 SLC25A40Q8TBP6 338 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 IP6K3Q96PC2 410 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 MMP25Q9NPA2 562 aa11.3□□□□□ -0.6
USP47-202ENST00000339865 TUBGCP6Q96RT7 1819 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 A0A1B0GTH9 108 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 TCRBV5S2A0A599 114 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 FOXF1Q12946 379 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 C4AP0C0L4 1744 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
USP47-202ENST00000339865 FAM216AQ8WUB2 273 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 TMEM171Q8WVE6 324 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 P2RX4Q99571 388 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 FXYD3Q14802 87 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 TMEM211Q6ICI0 200 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 PQLC2Q6ZP29 291 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 LYZL2Q7Z4W2 148 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 C2orf88Q9BSF0 95 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 C1RLQ9NZP8 487 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 IL36RNQ9UBH0 155 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 HCFC2Q9Y5Z7 792 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 FFAR1O14842 300 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 ZNF56Q15929 161 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 TMEM108Q6UXF1 575 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 PRSS27Q9BQR3 290 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 DPRXA6NFQ7 191 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 GDF9O60383 454 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 TCF24Q7RTU0 167 aa11.29□□□□□ -0.6
USP47-202ENST00000339865 TNRC6AQ8NDV7 1962 aaKnown RBP11.28□□□□□ -0.6
USP47-202ENST00000339865 NKX2-6A6NCS4 301 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 AMY1AP04745 511 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 VDAC1P21796 283 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 MVDP53602 400 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 METTL26Q96S19 204 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 ROS1P08922 2347 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 J3QR06 171 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 MT-ND6P03923 174 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 LIPFP07098 398 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 RAC3P60763 192 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 WNT2BQ93097 391 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 KIR2DL4Q99706 377 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 SLC25A20O43772 301 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 ZNF32P17041 273 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 LOXL3P58215 753 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 NRN1LQ496H8 165 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 TMEM177Q53S58 311 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 RIMKLAQ8IXN7 391 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 OR1L8Q8NGR8 309 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 KCNS1Q96KK3 526 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 COL3A1P02461 1466 aaPredicted RBP11.28□□□□□ -0.6
USP47-202ENST00000339865 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 A0A1B0GU03 582 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 ATP6V0CP27449 155 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 ZNF273Q14593 569 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 PYCR3Q53H96 274 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 C4orf45Q96LM5 186 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 H1FOOQ8IZA3 346 aaPredicted RBP11.28□□□□□ -0.6
USP47-202ENST00000339865 SIGMAR1Q99720 223 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 SLC23A3Q6PIS1 610 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 DOCK4Q8N1I0 1966 aa11.28□□□□□ -0.6
USP47-202ENST00000339865 PTPRDP23468 1912 aa11.27□□□□□ -0.6
USP47-202ENST00000339865 TRAV38-1A0A0B4J264 116 aa11.27□□□□□ -0.6
USP47-202ENST00000339865 KLK2P20151 261 aa11.27□□□□□ -0.6
USP47-202ENST00000339865 RAB1CQ92928 201 aa11.27□□□□□ -0.6
USP47-202ENST00000339865 OPN3Q9H1Y3 402 aaPredicted RBP11.27□□□□□ -0.6
USP47-202ENST00000339865 HS3ST3A1Q9Y663 406 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms