RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 RIMS4Q9H426 269 aaPredicted RBP13.99□□□□□ -0.17
TPM1-203ENST00000317516 DUSP21Q9H596 190 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 CHMP1AQ9HD42 196 aaPredicted RBP13.99□□□□□ -0.17
TPM1-203ENST00000317516 ISYNA1Q9NPH2 558 aa13.99□□□□□ -0.17
TPM1-203ENST00000317516 ELANEP08246 267 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 OR5H8P0DN80 308 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 VDAC1P21796 283 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 MYF6P23409 242 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 F2RL1P55085 397 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 LSAMPQ13449 338 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 FOXE3Q13461 319 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 TPBGQ13641 420 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 C8orf86Q6ZUL3 223 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 FAM71E2Q8N5Q1 922 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 OR2AK2Q8NG84 335 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 CCDC90BQ9GZT6 254 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 PLGRKTQ9HBL7 147 aa13.98□□□□□ -0.17
TPM1-203ENST00000317516 ZMAT5Q9UDW3 170 aaKnown RBP13.98□□□□□ -0.17
TPM1-203ENST00000317516 TMEM14DPA8MWL7 114 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 ARSBP15848 533 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 GNMTQ14749 295 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 MMDQ15546 238 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 HMGN3Q15651 99 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 NRG4Q8WWG1 115 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 IL1F10Q8WWZ1 152 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 ZNF251Q9BRH9 671 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 CHCHD6Q9BRQ6 235 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 ANKRD60Q9BZ19 345 aa13.97□□□□□ -0.17
TPM1-203ENST00000317516 PSMD7P51665 324 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 QRFPP83859 136 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 MLLT11Q13015 90 aaPredicted RBP13.96□□□□□ -0.17
TPM1-203ENST00000317516 UNC119Q13432 240 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 ETV3LQ6ZN32 361 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 MOB1BQ7L9L4 216 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 PRSS48Q7RTY5 328 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 SETD6Q8TBK2 473 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 NICN1Q9BSH3 213 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 GHITMQ9H3K2 345 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 PIPOXQ9P0Z9 390 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 ZNF107Q9UII5 783 aaPredicted RBP13.96□□□□□ -0.17
TPM1-203ENST00000317516 MGAT4AQ9UM21 535 aa13.96□□□□□ -0.17
TPM1-203ENST00000317516 PRKDCP78527 4128 aaKnown RBP13.96□□□□□ -0.18
TPM1-203ENST00000317516 CCL24O00175 119 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 SLC17A2O00624 439 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 RAB29O14966 203 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 NAPSAO96009 420 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 IGF1P05019 195 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 CPEP16870 476 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 CDX1P47902 265 aaPredicted RBP13.95□□□□□ -0.18
TPM1-203ENST00000317516 HSPA13P48723 471 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 ACTBP60709 375 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 FAM71F2Q6NXP2 309 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 TMEM91Q6ZNR0 172 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 ZNF833PQ6ZTB9 187 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 C18orf65Q6ZTR6 163 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 ODF3L1Q8IXM7 274 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 SVOPQ8N4V2 548 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 P2RX4Q99571 388 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 MGLLQ99685 303 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 NABP2Q9BQ15 211 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 MRPL20Q9BYC9 149 aaKnown RBP13.95□□□□□ -0.18
TPM1-203ENST00000317516 ACOT13Q9NPJ3 140 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 ZNF580Q9UK33 172 aa13.95□□□□□ -0.18
TPM1-203ENST00000317516 IGHG4P01861 327 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 RPLP1P05386 114 aaKnown RBP13.94□□□□□ -0.18
TPM1-203ENST00000317516 SLC2A2P11168 524 aaPredicted RBP13.94□□□□□ -0.18
TPM1-203ENST00000317516 CRHBPP24387 322 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 RPS25P62851 125 aaKnown RBP13.94□□□□□ -0.18
TPM1-203ENST00000317516 EGFEM1PQ0D2K5 195 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 KIR2DS1Q14954 304 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 P2RY14Q15391 338 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 RAB11BQ15907 218 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 DEFB121Q5J5C9 76 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 ZNF880Q6PDB4 577 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 C5orf24Q7Z6I8 188 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 FAM89BQ8N5H3 189 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 RNF152Q8N8N0 203 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 OR8U1Q8NH10 309 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 HSPB9Q9BQS6 159 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 LPAR5Q9H1C0 372 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 KIAA1456Q9P272 454 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 HSF4Q9ULV5 492 aa13.94□□□□□ -0.18
TPM1-203ENST00000317516 AK6Q9Y3D8 172 aaKnown RBP13.94□□□□□ -0.18
TPM1-203ENST00000317516 SAA2-SAA4A0A096LPE2 208 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 TRBV6-6A0A0A6YYG2 114 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 SOCS1O15524 211 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 SAA2P0DJI9 122 aaPredicted RBP13.93□□□□□ -0.18
TPM1-203ENST00000317516 ZBTB25P24278 435 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 CALRP27797 417 aaKnown RBP13.93□□□□□ -0.18
TPM1-203ENST00000317516 OR3A3P47888 321 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 LIN54Q6MZP7 749 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 CYYR1Q96J86 154 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 KCTD7Q96MP8 289 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 KCNK15Q9H427 330 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 SLC23A1Q9UHI7 598 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 BLOC1S6Q9UL45 172 aa13.93□□□□□ -0.18
TPM1-203ENST00000317516 ERICH4A6NGS2 130 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 ITGB1BP1O14713 200 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 NBR2O15453 112 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 HSPA12AO43301 675 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms