RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 APOA1P02647 267 aa21.65■■□□□ 1.06
SSU72-201ENST00000291386 ZBTB25P24278 435 aa21.65■■□□□ 1.06
SSU72-201ENST00000291386 BRS3P32247 399 aa21.65■■□□□ 1.06
SSU72-201ENST00000291386 MNDAP41218 407 aa21.65■■□□□ 1.06
SSU72-201ENST00000291386 GNG2P59768 71 aa21.65■■□□□ 1.06
SSU72-201ENST00000291386 ZNF816Q0VGE8 651 aaPredicted RBP21.65■■□□□ 1.06
SSU72-201ENST00000291386 PLA1AQ53H76 456 aa21.65■■□□□ 1.06
SSU72-201ENST00000291386 CABLES2Q9BTV7 478 aa21.65■■□□□ 1.06
SSU72-201ENST00000291386 ABHD14AQ9BUJ0 271 aa21.65■■□□□ 1.06
SSU72-201ENST00000291386 ZNF230Q9UIE0 474 aaPredicted RBP21.65■■□□□ 1.06
SSU72-201ENST00000291386 IGKV1-6A0A0C4DH72 117 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 H3BMQ9 156 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 SSX5O60225 188 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 SOX6P35712 828 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 RAB13P51153 203 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 HERPUD1Q15011 391 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 OR8H3Q8N146 312 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 DYNC2LI1Q8TCX1 351 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 NUDCD2Q8WVJ2 157 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 SLC23A1Q9UHI7 598 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 PITPNC1Q9UKF7 332 aa21.64■■□□□ 1.05
SSU72-201ENST00000291386 A0A1W2PPI3 338 aa21.63■■□□□ 1.05
SSU72-201ENST00000291386 HSD17B6O14756 317 aa21.63■■□□□ 1.05
SSU72-201ENST00000291386 EIF4EP06730 217 aaKnown RBP21.63■■□□□ 1.05
SSU72-201ENST00000291386 GSTT2P0CG29 244 aa21.63■■□□□ 1.05
SSU72-201ENST00000291386 GSTT2BP0CG30 244 aa21.63■■□□□ 1.05
SSU72-201ENST00000291386 ACTG1P63261 375 aa21.63■■□□□ 1.05
SSU72-201ENST00000291386 DIAPH2-AS1Q14236 149 aa21.63■■□□□ 1.05
SSU72-201ENST00000291386 OR2AK2Q8NG84 335 aa21.63■■□□□ 1.05
SSU72-201ENST00000291386 RAB18Q9NP72 206 aa21.63■■□□□ 1.05
SSU72-201ENST00000291386 A6NDX4 124 aa21.62■■□□□ 1.05
SSU72-201ENST00000291386 FAM90A9PA6NNJ1 464 aa21.62■■□□□ 1.05
SSU72-201ENST00000291386 GAPDHP04406 335 aaKnown RBP21.62■■□□□ 1.05
SSU72-201ENST00000291386 CRYBA1P05813 215 aa21.62■■□□□ 1.05
SSU72-201ENST00000291386 COMPP49747 757 aaPredicted RBP21.62■■□□□ 1.05
SSU72-201ENST00000291386 LY6EQ16553 131 aa21.62■■□□□ 1.05
SSU72-201ENST00000291386 IZUMO1Q8IYV9 350 aa21.62■■□□□ 1.05
SSU72-201ENST00000291386 MAFIPQ8WZ33 124 aa21.62■■□□□ 1.05
SSU72-201ENST00000291386 C1RLQ9NZP8 487 aa21.62■■□□□ 1.05
SSU72-201ENST00000291386 CCDC59Q9P031 241 aaKnown RBP21.62■■□□□ 1.05
SSU72-201ENST00000291386 OR1A1Q9P1Q5 309 aa21.62■■□□□ 1.05
SSU72-201ENST00000291386 TRBV6-7A0A0A0MS04 114 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 TXNL1O43396 289 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 NDUFA7O95182 113 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 CEACAM6P40199 344 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 TAS2R20P59543 309 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 HABP2Q14520 560 aaPredicted RBP21.61■■□□□ 1.05
SSU72-201ENST00000291386 TMEM69Q5SWH9 247 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 CCBE1Q6UXH8 406 aaPredicted RBP21.61■■□□□ 1.05
SSU72-201ENST00000291386 THNSL2Q86YJ6 484 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 ODF3L1Q8IXM7 274 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 EDARADDQ8WWZ3 215 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 CFHR4Q92496 578 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 GCDHQ92947 438 aaPredicted RBP21.61■■□□□ 1.05
SSU72-201ENST00000291386 RBM38Q9H0Z9 239 aaKnown RBP21.61■■□□□ 1.05
SSU72-201ENST00000291386 GHITMQ9H3K2 345 aa21.61■■□□□ 1.05
SSU72-201ENST00000291386 IGKV1D-8A0A087WSZ0 117 aa21.6■■□□□ 1.05
SSU72-201ENST00000291386 HSPA12AO43301 675 aa21.6■■□□□ 1.05
SSU72-201ENST00000291386 HPGDSO60760 199 aa21.6■■□□□ 1.05
SSU72-201ENST00000291386 ELK1P19419 428 aa21.6■■□□□ 1.05
SSU72-201ENST00000291386 FOXL1Q12952 345 aa21.6■■□□□ 1.05
SSU72-201ENST00000291386 IGSF11Q5DX21 431 aa21.6■■□□□ 1.05
SSU72-201ENST00000291386 LYG1Q8N1E2 194 aa21.6■■□□□ 1.05
SSU72-201ENST00000291386 RTN4IP1Q8WWV3 396 aaPredicted RBP21.6■■□□□ 1.05
SSU72-201ENST00000291386 AGMATQ9BSE5 352 aa21.6■■□□□ 1.05
SSU72-201ENST00000291386 ST6GALNAC5Q9BVH7 336 aa21.6■■□□□ 1.05
SSU72-201ENST00000291386 IGHV1-3A0A0C4DH29 117 aa21.59■■□□□ 1.05
SSU72-201ENST00000291386 LANCL1O43813 399 aa21.59■■□□□ 1.05
SSU72-201ENST00000291386 LPLP06858 475 aa21.59■■□□□ 1.05
SSU72-201ENST00000291386 RELBQ01201 579 aa21.59■■□□□ 1.05
SSU72-201ENST00000291386 DHRS7BQ6IAN0 325 aaPredicted RBP21.59■■□□□ 1.05
SSU72-201ENST00000291386 SPATA3Q8NHX4 192 aa21.59■■□□□ 1.05
SSU72-201ENST00000291386 IFI27L2Q9H2X8 130 aa21.59■■□□□ 1.05
SSU72-201ENST00000291386 SMIM31A0A1B0GVY4 71 aa21.58■■□□□ 1.05
SSU72-201ENST00000291386 ZNF701M0R085 212 aaPredicted RBP21.58■■□□□ 1.05
SSU72-201ENST00000291386 TIMM23O14925 209 aa21.58■■□□□ 1.05
SSU72-201ENST00000291386 CBX5P45973 191 aa21.58■■□□□ 1.05
SSU72-201ENST00000291386 FAM71F2Q6NXP2 309 aa21.58■■□□□ 1.05
SSU72-201ENST00000291386 HOGA1Q86XE5 327 aa21.58■■□□□ 1.05
SSU72-201ENST00000291386 OR10J5Q8NHC4 309 aa21.58■■□□□ 1.05
SSU72-201ENST00000291386 PARP12Q9H0J9 701 aaKnown RBP21.58■■□□□ 1.05
SSU72-201ENST00000291386 C11orf54Q9H0W9 315 aaPredicted RBP21.58■■□□□ 1.05
SSU72-201ENST00000291386 RDH8Q9NYR8 311 aa21.58■■□□□ 1.05
SSU72-201ENST00000291386 PIPOXQ9P0Z9 390 aa21.58■■□□□ 1.05
SSU72-201ENST00000291386 CHST1O43916 411 aa21.57■■□□□ 1.04
SSU72-201ENST00000291386 HLA-DQB1P01920 261 aa21.57■■□□□ 1.04
SSU72-201ENST00000291386 CTXN2P0C2S0 81 aa21.57■■□□□ 1.04
SSU72-201ENST00000291386 CNIH2Q6PI25 160 aa21.57■■□□□ 1.04
SSU72-201ENST00000291386 ZNF833PQ6ZTB9 187 aa21.57■■□□□ 1.04
SSU72-201ENST00000291386 C16orf82Q7Z2V1 217 aa21.57■■□□□ 1.04
SSU72-201ENST00000291386 TGIF2LXQ8IUE1 241 aa21.57■■□□□ 1.04
SSU72-201ENST00000291386 DRAM1Q8N682 238 aa21.57■■□□□ 1.04
SSU72-201ENST00000291386 ANXA10Q9UJ72 324 aa21.57■■□□□ 1.04
SSU72-201ENST00000291386 BET1O15155 118 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 ST8SIA5O15466 376 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 TSPAN9O75954 239 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 TPPPO94811 219 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 FAM106CPP0CH98 169 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 PTHLHP12272 177 aa21.56■■□□□ 1.04
SSU72-201ENST00000291386 REG1BP48304 166 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms