RNA–Protein interactions for RNA: ENST00000253024.9

TRIM28-201, Transcript of tripartite motif containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM28, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-201ENST00000253024 PRAMEF6Q5VXH4 476 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 SLC25A40Q8TBP6 338 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 TECTBQ96PL2 329 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 CLN8Q9UBY8 286 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 INTS1Q8N201 2190 aaKnown RBP18.03■□□□□ 0.48
TRIM28-201ENST00000253024 CEBPZOSA8MTT3 80 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 SP1P08047 785 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 ARR3P36575 388 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 B2MP61769 119 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 OR5D13Q8NGL4 314 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 MIOXQ9UGB7 285 aa18.03■□□□□ 0.48
TRIM28-201ENST00000253024 SYNGR2O43760 224 aa18.02■□□□□ 0.48
TRIM28-201ENST00000253024 FABP1P07148 127 aa18.02■□□□□ 0.48
TRIM28-201ENST00000253024 S100GP29377 79 aa18.02■□□□□ 0.48
TRIM28-201ENST00000253024 HAPLN4Q86UW8 402 aa18.02■□□□□ 0.48
TRIM28-201ENST00000253024 MRGPRDQ8TDS7 321 aa18.02■□□□□ 0.48
TRIM28-201ENST00000253024 NIPSNAP3BQ9BS92 247 aa18.02■□□□□ 0.48
TRIM28-201ENST00000253024 AURKAIP1Q9NWT8 199 aaPredicted RBP18.02■□□□□ 0.48
TRIM28-201ENST00000253024 ARFGEF3Q5TH69 2177 aa18.02■□□□□ 0.47
TRIM28-201ENST00000253024 TUBG1P23258 451 aa18.02■□□□□ 0.47
TRIM28-201ENST00000253024 MPV17P39210 176 aa18.02■□□□□ 0.47
TRIM28-201ENST00000253024 ZNF787Q6DD87 383 aa18.02■□□□□ 0.47
TRIM28-201ENST00000253024 H1FOOQ8IZA3 346 aaPredicted RBP18.02■□□□□ 0.47
TRIM28-201ENST00000253024 GATAD1Q8WUU5 269 aa18.02■□□□□ 0.47
TRIM28-201ENST00000253024 OR51I2Q9H344 312 aa18.02■□□□□ 0.47
TRIM28-201ENST00000253024 PKDREJQ9NTG1 2253 aa18.02■□□□□ 0.47
TRIM28-201ENST00000253024 TRGC2P03986 189 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 IFNA4P05014 189 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 EDDM3AQ14507 147 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 SPNS3Q6ZMD2 512 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 CLDND2Q8NHS1 167 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 ZDHHC16Q969W1 377 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 OR2D2Q9H210 308 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 SLC25A22Q9H936 323 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 PLCE1Q9P212 2302 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 GABRA2P47869 451 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 ZNF726P1Q15940 193 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 SSX9Q7RTT3 188 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 DRAM1Q8N682 238 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 ABHD14BQ96IU4 210 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 METRNQ9UJH8 293 aa18.01■□□□□ 0.47
TRIM28-201ENST00000253024 UCP2P55851 309 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 TAS2R30P59541 319 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 ZNF585BQ52M93 769 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 COMMD1Q8N668 190 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 ZFHX2Q9C0A1 2572 aaPredicted RBP18■□□□□ 0.47
TRIM28-201ENST00000253024 CCL11P51671 97 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 PPP1CBP62140 327 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 RHEBQ15382 184 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 WDR25Q64LD2 544 aaPredicted RBP18■□□□□ 0.47
TRIM28-201ENST00000253024 MUCL1Q96DR8 90 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 OR4C12Q96R67 309 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 CDH20Q9HBT6 801 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 GSN-AS1Q9NRJ2 163 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 KIAA1456Q9P272 454 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 UBE2NP61088 152 aaKnown RBP18■□□□□ 0.47
TRIM28-201ENST00000253024 FIP1L1Q6UN15 594 aaKnown RBP18■□□□□ 0.47
TRIM28-201ENST00000253024 LFNGQ8NES3 379 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 TRIB1Q96RU8 372 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 LINC00470Q9BZP3 86 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 EGLN1Q9GZT9 426 aa18■□□□□ 0.47
TRIM28-201ENST00000253024 SSTR5P35346 364 aa17.99■□□□□ 0.47
TRIM28-201ENST00000253024 RAB2AP61019 212 aa17.99■□□□□ 0.47
TRIM28-201ENST00000253024 RPL30P62888 115 aaKnown RBP17.99■□□□□ 0.47
TRIM28-201ENST00000253024 TLE4Q04727 773 aa17.99■□□□□ 0.47
TRIM28-201ENST00000253024 HES3Q5TGS1 186 aa17.99■□□□□ 0.47
TRIM28-201ENST00000253024 FBXW9Q5XUX1 488 aa17.99■□□□□ 0.47
TRIM28-201ENST00000253024 Q6P435 159 aa17.99■□□□□ 0.47
TRIM28-201ENST00000253024 RPUSD4Q96CM3 377 aaKnown RBP17.99■□□□□ 0.47
TRIM28-201ENST00000253024 FGFRL1Q8N441 504 aa17.99■□□□□ 0.47
TRIM28-201ENST00000253024 GNPNAT1Q96EK6 184 aaPredicted RBP17.99■□□□□ 0.47
TRIM28-201ENST00000253024 TNRC6BQ9UPQ9 1833 aaKnown RBP17.99■□□□□ 0.47
TRIM28-201ENST00000253024 KALRNO60229 2985 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 TRGV5A0A0B4J1U4 118 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 UBE2CO00762 179 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 CD200P41217 278 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 AP4M1O00189 453 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 FOLR2P14207 255 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 HOXA6P31267 233 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 PSG7Q13046 419 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 ELOBQ15370 118 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 HEPN1Q6WQI6 88 aa17.98■□□□□ 0.47
TRIM28-201ENST00000253024 CLEC18AA5D8T8 446 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 CTXN2P0C2S0 81 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 LMO1P25800 156 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 TBC1D28Q2M2D7 210 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 C9orf152Q5JTZ5 239 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 CLEC18CQ8NCF0 446 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 Q8NFD4 153 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 J3QT63 122 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 EGR1P18146 543 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 IL2RGP31785 369 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 Q6ZR03 302 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 BCL2L2Q92843 193 aaPredicted RBP17.97■□□□□ 0.47
TRIM28-201ENST00000253024 RCC1LQ96I51 464 aaKnown RBP17.97■□□□□ 0.47
TRIM28-201ENST00000253024 RBKSQ9H477 322 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 DOK5Q9P104 306 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 OR5H1A6NKK0 313 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 IFNA17P01571 189 aa17.97■□□□□ 0.47
TRIM28-201ENST00000253024 IL24Q13007 206 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms