RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 DeddQ9Z1L3 318 aa8.57□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Parp4E9PYK3 1969 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Vmn1r160E9Q346 307 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Prss32E9Q409 334 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm12169F2Z474 250 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm5218F6YH22 154 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm29394H3BIW7 199 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Vmn1r123L7N270 307 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Mtco2P00405 227 aaKnown RBP8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 TpbpaP13438 124 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 GrprP21729 384 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Hoxb13P70321 286 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Atf1P81269 269 aaKnown RBP8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 BaxQ07813 192 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 DmwdQ08274 665 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Wdr34Q5U4F6 535 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Drd1Q61616 446 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Zfp729bQ80VN4 1045 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tmem169Q8BG50 297 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm9999Q8C5Y2 53 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Fbxl8Q8CIG9 374 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Vmn1r208Q8R275 308 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Vmn1r233Q8R294 319 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Vmn1r178Q8R2B6 304 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ddah2Q99LD8 285 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ndufs4Q9CXZ1 175 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tmem30cQ9D4D7 342 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tmem54Q9D7S1 219 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Mmp1aQ9EPL5 464 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm12057A0A087WR21 115 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Vmn1r20K7N778 303 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 P01881 257 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ercc1P07903 298 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 UcnP81615 122 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 NrtnP97463 195 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Thbs3Q05895 956 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Sppl2bQ3TD49 578 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Prrc1Q3UPH1 443 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Cnrip1Q5M8N0 164 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Cyb561Q60720 250 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr5Q60889 312 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ltbp3Q61810 1268 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 CishQ62225 257 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Lpar4Q8BLG2 370 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Cnksr3Q8BMA3 555 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gramd1cQ8CI52 457 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Taf10Q8K0H5 218 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Cadm4Q8R464 388 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr960Q8VET5 316 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ms4a6cQ99N08 217 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Rnf115Q9D0C1 305 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Fkbp11Q9D1M7 201 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Klrc3Q9QXN7 221 aa8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ndufa7Q9Z1P6 113 aaKnown RBP8.56□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr1432A0A140LHS7 346 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm45692D3Z0A0 150 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm8334F7CD45 553 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm8374L7N2A9 172 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Cldn2O88552 230 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 P01629 112 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gm5571P01639 130 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Fcgr1P26151 404 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ptger4P32240 513 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Stfa1P35175 97 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 TigitP86176 249 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Gcnt7Q3V3K7 433 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr12Q60894 333 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Commd3Q63829 195 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr1000Q7TR99 314 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Zar1Q80SU3 361 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 MepceQ8K3A9 666 aaKnown RBP8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 SccpdhQ8R127 429 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr968Q8VFN4 314 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr57Q8VGU7 319 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tm7sf3Q9CRG1 565 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Notch4P31695 1964 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Heatr5bQ8C547 2070 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Arhgap21Q6DFV3 1944 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Pcdh15Q99PJ1 1943 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Bcl6bO88282 474 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Smap2Q7TN29 428 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr453Q7TRV7 317 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 EtdQ80SW5 59 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Zfp819Q80V81 607 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Stk17bQ8BG48 372 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Znf8Q8BGV5 572 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ap5m1Q8BJ63 490 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Ankrd55Q8BLD6 626 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Vwa1Q8R2Z5 415 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr862Q8VFJ1 306 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tm4sf5Q91XF2 196 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tex12Q9CR81 123 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Msmo1Q9CRA4 293 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Glipr1Q9CWG1 255 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Tysnd1Q9DBA6 568 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 PaplnQ9EPX2 1280 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr955Q9EQ97 314 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Olfr930Q9EQ99 308 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 Scamp4Q9JKV5 230 aa8.55□□□□□ -1.04
Hmgb1-201ENSMUST00000085546 St6galnac3Q9WUV2 305 aa8.55□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms