RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 PECRQ9BY49 303 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 RANBP3Q9H6Z4 567 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-227ENST00000641811 LIN7BQ9HAP6 207 aa13.87□□□□□ -0.19
PHGDH-227ENST00000641811 LOC100506127A0A0U1RQW1 187 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 TNFAIP8O95379 198 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 CLEC2LP0C7M8 214 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
PHGDH-227ENST00000641811 ARHGDIBP52566 201 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 MOGAT2Q3SYC2 334 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 CT45A1Q5HYN5 189 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 Q6ZTK2 550 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 LINC00311Q8N616 119 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 DRAM1Q8N682 238 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 OR56B1Q8NGI3 324 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 OR56B4Q8NH76 319 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 CT45A3Q8NHU0 189 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 CAPSLQ8WWF8 208 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 CITED1Q99966 193 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 OCSTAMPQ9BR26 566 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 RAB9BQ9NP90 201 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 OR2S2Q9NQN1 319 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 HSF4Q9ULV5 492 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 NBEAL1Q6ZS30 2694 aa13.86□□□□□ -0.19
PHGDH-227ENST00000641811 PKD1L1Q8TDX9 2849 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 A0A087WXM4 84 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 HSD17B6O14756 317 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 SDC2P34741 201 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 HMGN3Q15651 99 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 HIST2H2BDQ6DRA6 164 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 ZNF880Q6PDB4 577 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 SLC25A48Q6ZT89 311 aaKnown RBP13.85□□□□□ -0.19
PHGDH-227ENST00000641811 ZNF554Q86TJ5 538 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 C8orf31Q8N9H6 132 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 OR2T6Q8NHC8 308 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 SGMS2Q8NHU3 365 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 CFHR4Q92496 578 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 KCTD7Q96MP8 289 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 CENPOQ9BU64 300 aa13.85□□□□□ -0.19
PHGDH-227ENST00000641811 FAM90A9PA6NNJ1 464 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 NOTOA8MTQ0 251 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 SNRNP70P08621 437 aaKnown RBP13.84□□□□□ -0.19
PHGDH-227ENST00000641811 RANBP1P43487 201 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 RAB7AP51149 207 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 MXD1Q05195 221 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 TMEM30BQ3MIR4 351 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 MORN2Q502X0 79 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 MOB3BQ86TA1 216 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 TPRA1Q86W33 373 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 IL1F10Q8WWZ1 152 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 ST6GALNAC6Q969X2 333 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 RBMXL1Q96E39 390 aaKnown RBP13.84□□□□□ -0.19
PHGDH-227ENST00000641811 SLC25A33Q9BSK2 321 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 PRSS22Q9GZN4 317 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 DAPK2Q9UIK4 370 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 KCNK7Q9Y2U2 307 aa13.84□□□□□ -0.19
PHGDH-227ENST00000641811 IGHV3-72A0A0B4J1Y9 119 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 IGHV1-3A0A0C4DH29 117 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 SH2D7A6NKC9 451 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-227ENST00000641811 GAPDHP04406 335 aaKnown RBP13.83□□□□□ -0.2
PHGDH-227ENST00000641811 VSIG10L2P0DP72 767 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 HTD2P86397 168 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 ZNF816Q0VGE8 651 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-227ENST00000641811 HNF4GQ14541 408 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 TMEM95Q3KNT9 176 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 Q3ZCU0 254 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 OR8H3Q8N146 312 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 Q8N2B8 174 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 KLHDC1Q8N7A1 406 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 OR10R2Q8NGX6 335 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 GALMQ96C23 342 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 RAB3CQ96E17 227 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 RBM14Q96PK6 669 aaKnown RBP13.83□□□□□ -0.2
PHGDH-227ENST00000641811 CMSS1Q9BQ75 279 aaKnown RBP13.83□□□□□ -0.2
PHGDH-227ENST00000641811 RIMS4Q9H426 269 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-227ENST00000641811 ZNF696Q9H7X3 374 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 SERTAD4Q9NUC0 356 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 ABRACLQ9P1F3 81 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 JPT1Q9UK76 154 aa13.83□□□□□ -0.2
PHGDH-227ENST00000641811 A0A075B6Q4 140 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 TRBV6-6A0A0A6YYG2 114 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 RAB27BO00194 218 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 OR2F2O95006 317 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 FAM106CPP0CH98 169 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 SNRPBP14678 240 aaKnown RBP13.82□□□□□ -0.2
PHGDH-227ENST00000641811 GNB3P16520 340 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 RAB6AP20340 208 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 IL3RAP26951 378 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 TGFBR1P36897 503 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 HES1Q14469 280 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 SFXN4Q6P4A7 337 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 MOB1BQ7L9L4 216 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 THNSL2Q86YJ6 484 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 RTN4IP1Q8WWV3 396 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-227ENST00000641811 ATG5Q9H1Y0 275 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 C12orf4Q9NQ89 552 aa13.82□□□□□ -0.2
PHGDH-227ENST00000641811 IGKV1D-33P01593 117 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 IGKV1-33P01594 117 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 AMY1AP04745 511 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 AMY2AP04746 511 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 ABCA11PQ4W5N1 156 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms