RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 CFHR4Q92496 578 aa6.32□□□□□ -1.4
CCDC163-204ENST00000628293 ST6GALNAC6Q969X2 333 aa6.32□□□□□ -1.4
CCDC163-204ENST00000628293 ELF5Q9UKW6 265 aaPredicted RBP6.32□□□□□ -1.4
CCDC163-204ENST00000628293 MMP24Q9Y5R2 645 aa6.32□□□□□ -1.4
CCDC163-204ENST00000628293 IGKV1-6A0A0C4DH72 117 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 BTBD17A6NE02 478 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 FAM90A9PA6NNJ1 464 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 LEUTXA8MZ59 168 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 TOR1AO14656 332 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 SPINT2O43291 252 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 TSPAN9O75954 239 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 GABARAPO95166 117 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 HIST1H1DP16402 221 aaKnown RBP6.31□□□□□ -1.4
CCDC163-204ENST00000628293 GNB3P16520 340 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 CD24P25063 80 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
CCDC163-204ENST00000628293 RANBP1P43487 201 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 ZNF137PP52743 207 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 PRRX1P54821 245 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 RAG2P55895 527 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 HLA-DRB3P79483 266 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 HTD2P86397 168 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 FOXL1Q12952 345 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 HABP2Q14520 560 aaPredicted RBP6.31□□□□□ -1.4
CCDC163-204ENST00000628293 HERPUD1Q15011 391 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 CTF1Q16619 201 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 TMEM30BQ3MIR4 351 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 MORN2Q502X0 79 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 CT45A1Q5HYN5 189 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 DHRS7BQ6IAN0 325 aaPredicted RBP6.31□□□□□ -1.4
CCDC163-204ENST00000628293 SLC25A48Q6ZT89 311 aaKnown RBP6.31□□□□□ -1.4
CCDC163-204ENST00000628293 MOB1BQ7L9L4 216 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 TMEM219Q86XT9 240 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 ODF3L1Q8IXM7 274 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 PRR18Q8N4B5 295 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 OR52L2PQ8NGH6 319 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 CT45A3Q8NHU0 189 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 RAB3CQ96E17 227 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 CMSS1Q9BQ75 279 aaKnown RBP6.31□□□□□ -1.4
CCDC163-204ENST00000628293 OCSTAMPQ9BR26 566 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 MRPS26Q9BYN8 205 aaKnown RBP6.31□□□□□ -1.4
CCDC163-204ENST00000628293 PARP12Q9H0J9 701 aaKnown RBP6.31□□□□□ -1.4
CCDC163-204ENST00000628293 Q9N2K0 584 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 C12orf4Q9NQ89 552 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.31□□□□□ -1.4
CCDC163-204ENST00000628293 JPT1Q9UK76 154 aa6.31□□□□□ -1.4
CCDC163-204ENST00000628293 IGKV1D-8A0A087WSZ0 117 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 OOSP1A8MZH6 123 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 HSD17B6O14756 317 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 FCGR3AP08637 254 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 SCTP09683 121 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 PPP1CCP36873 323 aaKnown RBP6.3□□□□□ -1.4
CCDC163-204ENST00000628293 SCAND1P57086 179 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 PROK1P58294 105 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 KRTAP10-3P60369 221 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 VBP1P61758 197 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 ZNF816Q0VGE8 651 aaPredicted RBP6.3□□□□□ -1.4
CCDC163-204ENST00000628293 MADCAM1Q13477 382 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 LY6G6FQ5SQ64 297 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 IDNKQ5T6J7 187 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 C12orf54Q6X4T0 127 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 LIAT1Q6ZQX7 453 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 Q6ZS46 218 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 ANKRD13BQ86YJ7 626 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 OR4F5Q8NH21 305 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 LINC01006Q8NI28 216 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 WFDC12Q8WWY7 111 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 TOMM40LQ969M1 308 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 CREB3L1Q96BA8 519 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 RBMXL1Q96E39 390 aaKnown RBP6.3□□□□□ -1.4
CCDC163-204ENST00000628293 ATG5Q9H1Y0 275 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 IFI27L2Q9H2X8 130 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 RIMS4Q9H426 269 aaPredicted RBP6.3□□□□□ -1.4
CCDC163-204ENST00000628293 C16orf95Q9H693 158 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 OR2S2Q9NQN1 319 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 RHBDL2Q9NX52 303 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 OR1A1Q9P1Q5 309 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 GNG12Q9UBI6 72 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 AMMECR1Q9Y4X0 333 aaPredicted RBP6.3□□□□□ -1.4
CCDC163-204ENST00000628293 ETV7Q9Y603 341 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 NBEAL1Q6ZS30 2694 aa6.3□□□□□ -1.4
CCDC163-204ENST00000628293 WNK1Q9H4A3 2382 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 A0A075B6Q4 140 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 IGHV1-3A0A0C4DH29 117 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 CLPSL1A2RUU4 121 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 METTL21EPA6NDL7 271 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 TMEM235A6NFC5 223 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 POM121CA8CG34 1229 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 SERPINE3A8MV23 424 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 TIMM23O14925 209 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 SSX5O60225 188 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 YPEL1O60688 119 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 AMY1AP04745 511 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 AMY2AP04746 511 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 CRYBA1P05813 215 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 CEACAM3P40198 252 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 REG1BP48304 166 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 SERPINB10P48595 397 aa6.29□□□□□ -1.4
CCDC163-204ENST00000628293 SRSF4Q08170 494 aaKnown RBP6.29□□□□□ -1.4
CCDC163-204ENST00000628293 ZNF260Q3ZCT1 412 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms