RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 IGKV1-8A0A0C4DH67 115 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 hADV38S2A0JD32 116 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 ZP4Q12836 540 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 OR52M1Q8NGK5 317 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 VSTM2AQ8TAG5 236 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 TXNDC17Q9BRA2 123 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 MYOZ1Q9NP98 299 aaPredicted RBP16.41■□□□□ 0.22
SPAST-203ENST00000615843 PIPOXQ9P0Z9 390 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 C3orf80F5H4A9 247 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 HIST1H1BP16401 226 aaKnown RBP16.41■□□□□ 0.22
SPAST-203ENST00000615843 C10orf113Q5VZT2 155 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 RHBDD2Q6NTF9 364 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 TMEM183AQ8IXX5 376 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 TMEM38BQ9NVV0 291 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 DOCK1Q14185 1865 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 A0A0U1RQV5 110 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 ZNF729A6NN14 1252 aaPredicted RBP16.4■□□□□ 0.22
SPAST-203ENST00000615843 C9orf40Q8IXQ3 194 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 OR8I2Q8N0Y5 310 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 OR4X1Q8NH49 305 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 GUSBP11Q6P575 273 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 ZFP30Q9Y2G7 519 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 TAF15Q92804 592 aaKnown RBP eCLIP16.4■□□□□ 0.22
SPAST-203ENST00000615843 WFIKKN1Q96NZ8 548 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 UCN2Q96RP3 112 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 AGAP20933 346 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 IL11RAQ14626 422 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 SLC35E4Q6ICL7 350 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 ZPBPQ9BS86 351 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 PRNDQ9UKY0 176 aa16.4■□□□□ 0.22
SPAST-203ENST00000615843 MIA3Q5JRA6 1907 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 MOSPD3O75425 235 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 PAPPAQ13219 1627 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 IGLV1-36A0A0B4J1U3 117 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 TM4SF19Q96DZ7 209 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 RPP25Q9BUL9 199 aaKnown RBP16.39■□□□□ 0.21
SPAST-203ENST00000615843 LYZL6O75951 148 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 ZNF708P17019 499 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 ZNF83P51522 516 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 RPEQ96AT9 228 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 SAP30LQ9HAJ7 183 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 UFC1Q9Y3C8 167 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 USP54Q70EL1 1684 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 HBZP02008 142 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 NGFRP08138 427 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 GZMHP20718 246 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 PXMP4Q9Y6I8 212 aa16.39■□□□□ 0.21
SPAST-203ENST00000615843 A0A0G2JK05 382 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 HLA-DQA1P01909 254 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 RPS11P62280 158 aaKnown RBP eCLIP16.38■□□□□ 0.21
SPAST-203ENST00000615843 SMAD4Q13485 552 aaKnown RBP16.38■□□□□ 0.21
SPAST-203ENST00000615843 C2orf68Q2NKX9 166 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 K7ESF4 209 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 COMPP49747 757 aaPredicted RBP16.38■□□□□ 0.21
SPAST-203ENST00000615843 STXBP6Q8NFX7 210 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 OR52L2PQ8NGH6 319 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 TMEM140Q9NV12 185 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 PCOLCE2Q9UKZ9 415 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 UQCRFS1P47985 274 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 PLP1P60201 277 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 TMEM92Q6UXU6 159 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 GPR35Q9HC97 309 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 RALYQ9UKM9 306 aaKnown RBP16.38■□□□□ 0.21
SPAST-203ENST00000615843 WIPI2Q9Y4P8 454 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 NPTNQ9Y639 398 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 F5H697 171 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 FOXS1O43638 330 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 HIKESHIQ53FT3 197 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 PERPQ96FX8 193 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 GABRG3Q99928 467 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 CKAP5Q14008 2032 aa16.38■□□□□ 0.21
SPAST-203ENST00000615843 POU2F2P09086 479 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 RNF224P0DH78 156 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 ERGP11308 486 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 IL11P20809 199 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 NMUP48645 174 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 LAMB2P55268 1798 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 HOXB1P14653 301 aaPredicted RBP16.37■□□□□ 0.21
SPAST-203ENST00000615843 WNT5AP41221 380 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 TNXAQ16473 311 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 SPEM1Q8N4L4 309 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 ABHD3Q8WU67 409 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 SNCGO76070 127 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 SRSF9Q13242 221 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPAST-203ENST00000615843 COL25A1Q9BXS0 654 aaPredicted RBP16.37■□□□□ 0.21
SPAST-203ENST00000615843 NPVFQ9HCQ7 196 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 MEOX1P50221 254 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 HYAL1Q12794 435 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 IBA57Q5T440 356 aaKnown RBP16.37■□□□□ 0.21
SPAST-203ENST00000615843 OR2M3Q8NG83 312 aa16.37■□□□□ 0.21
SPAST-203ENST00000615843 MSGN1A6NI15 193 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 LINC01590Q5TEZ4 76 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 OR2I1PQ8NGU4 316 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 KIAA0100Q14667 2235 aaKnown RBP16.36■□□□□ 0.21
SPAST-203ENST00000615843 KIAA1217Q5T5P2 1943 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 ACP1P24666 158 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 SELENOHQ8IZQ5 122 aaKnown RBP16.36■□□□□ 0.21
SPAST-203ENST00000615843 CADM4Q8NFZ8 388 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 ZNF721Q8TF20 911 aa16.36■□□□□ 0.21
SPAST-203ENST00000615843 RBKSQ9H477 322 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms