RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 CHCHD3Q9NX63 227 aaKnown RBP11.6□□□□□ -0.55
CTSA-216ENST00000607212 KIAA1456Q9P272 454 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 RYR3Q15413 4870 aa11.6□□□□□ -0.55
CTSA-216ENST00000607212 UBE2QL1A1L167 161 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 G3V318 75 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 CRTAPO75718 401 aaPredicted RBP11.59□□□□□ -0.55
CTSA-216ENST00000607212 PSMB8P28062 276 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 CHATP28329 748 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 ETV1P50549 477 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 INSL3P51460 131 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 ACTBP60709 375 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 CFHR3Q02985 330 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 LSAMPQ13449 338 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 MED21Q13503 144 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 ECSCRQ19T08 205 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 UBE2E2Q96LR5 201 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 ABHD14AQ9BUJ0 271 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 SELENOIQ9C0D9 397 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 BANF2Q9H503 90 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 PALMDQ9NP74 551 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 ERGIC3Q9Y282 383 aa11.59□□□□□ -0.55
CTSA-216ENST00000607212 TRAV41A0A0B4J266 112 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 PNMA8CA0A1B0GUJ8 204 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 A0A1W2PPK0 400 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 IRGMA1A4Y4 181 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 H3BNX3 289 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 OVOL1O14753 267 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 ATP6V0E1O15342 81 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 LANCL1O43813 399 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 MAS1P04201 325 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 IGF1P05019 195 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 RCC1P18754 421 aaPredicted RBP11.58□□□□□ -0.56
CTSA-216ENST00000607212 ZNF134P52741 427 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 FHL3Q13643 280 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 PLGLAQ15195 96 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 SMN1Q16637 294 aaKnown RBP11.58□□□□□ -0.56
CTSA-216ENST00000607212 OVCH2Q7RTZ1 564 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 ZNF491Q8N8L2 437 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 ZFP41Q8N8Y5 198 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 ZNF439Q8NDP4 499 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 OR52L2PQ8NGH6 319 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 SMIM19Q96E16 107 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 MRPS24Q96EL2 167 aaKnown RBP11.58□□□□□ -0.56
CTSA-216ENST00000607212 RCHY1Q96PM5 261 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 CHCHD6Q9BRQ6 235 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 MRPL20Q9BYC9 149 aaKnown RBP11.58□□□□□ -0.56
CTSA-216ENST00000607212 KLK15Q9H2R5 256 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 OR51J1Q9H342 316 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 TAF9BQ9HBM6 251 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 FGF20Q9NP95 211 aaPredicted RBP11.58□□□□□ -0.56
CTSA-216ENST00000607212 A3GALT2U3KPV4 340 aa11.58□□□□□ -0.56
CTSA-216ENST00000607212 TENM3Q9P273 2699 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 MAGEA13PA6NCF6 341 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 NBR2O15453 112 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 CNTFRP26992 372 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 DCKP27707 260 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 PPP1CCP36873 323 aaKnown RBP11.57□□□□□ -0.56
CTSA-216ENST00000607212 GNB1P62873 340 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 GNMTQ14749 295 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 Q499Y3 187 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 ZNF429Q86V71 674 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 MUC7Q8TAX7 377 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 APH1BQ8WW43 257 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 DCUN1D4Q92564 292 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 GHSRQ92847 366 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 SLC29A1Q99808 456 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 GHITMQ9H3K2 345 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 ZMAT4Q9H898 229 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 MRPS18AQ9NVS2 196 aaKnown RBP11.57□□□□□ -0.56
CTSA-216ENST00000607212 BABAM2Q9NXR7 383 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 EXOSC1Q9Y3B2 195 aaKnown RBP11.57□□□□□ -0.56
CTSA-216ENST00000607212 SORL1Q92673 2214 aa11.57□□□□□ -0.56
CTSA-216ENST00000607212 A0A1W2PN81 502 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 RGS11O94810 467 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 MGMTP16455 207 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 BLVRBP30043 206 aaPredicted RBP11.56□□□□□ -0.56
CTSA-216ENST00000607212 CHRNA7P36544 502 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 RAB9AP51151 201 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 ZNF137PP52743 207 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 ADARB1P78563 741 aaKnown RBP11.56□□□□□ -0.56
CTSA-216ENST00000607212 MORN2Q502X0 79 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 YIF1BQ5BJH7 314 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 LIN54Q6MZP7 749 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 ANKRD60Q9BZ19 345 aa11.56□□□□□ -0.56
CTSA-216ENST00000607212 ALX4Q9H161 411 aaPredicted RBP11.56□□□□□ -0.56
CTSA-216ENST00000607212 RCC2Q9P258 522 aaKnown RBP11.56□□□□□ -0.56
CTSA-216ENST00000607212 TRAV8-7A0A075B6U6 113 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 OGG1O15527 345 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 BAG2O95816 211 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 HLA-DRB1P01911 266 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 IGFBP3P17936 291 aaPredicted RBP11.55□□□□□ -0.56
CTSA-216ENST00000607212 FUT3P21217 361 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 VHLP40337 213 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 SLURP1P55000 103 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 SRSF7Q16629 238 aaKnown RBP eCLIP11.55□□□□□ -0.56
CTSA-216ENST00000607212 SBSPONQ8IVN8 264 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 OR2AK2Q8NG84 335 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 OR6Q1Q8NGQ2 317 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 SETD6Q8TBK2 473 aa11.55□□□□□ -0.56
CTSA-216ENST00000607212 FAM46BQ96A09 425 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms