RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 OR8U8P0C7N1 319 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF16P17020 682 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 MUCL1Q96DR8 90 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 MMP24Q9Y5R2 645 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 DFFBO76075 338 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 CNOT4O95628 575 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 S100A8P05109 93 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 SP1P08047 785 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 TAGLN2P37802 199 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 UBE2KP61086 200 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 B2MP61769 119 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF506Q5JVG8 444 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 HEPN1Q6WQI6 88 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF429Q86V71 674 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 BCL2L2Q92843 193 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 RAB40CQ96S21 281 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 DEFB127Q9H1M4 99 aa17.14■□□□□ 0.33
SHKBP1-225ENST00000600733 LNP1A1A4G5 178 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 C21orf140B9A014 251 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 OR2H2O95918 312 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 IGKV1-5P01602 117 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 CELA3BP08861 270 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 SMIM6P0DI80 62 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 DLK1P80370 383 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 BCL2L14Q9BZR8 327 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 KCNS2Q9ULS6 477 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 RBM7Q9Y580 266 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 IFNA5P01569 189 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 HSPB1P04792 205 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 METTL15P1P0C7V9 234 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 SLC25A6P12236 298 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 MAS1LP35410 378 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 ARL16Q0P5N6 197 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF343Q6P1L6 599 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 GP6Q9HCN6 339 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 TRAPPC2LQ9UL33 140 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 GTF3C1Q12789 2109 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 LOC400499M0QZD8 3231 aa17.13■□□□□ 0.33
SHKBP1-225ENST00000600733 ERVS71-1P61550 626 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 S100A12P80511 92 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 TMEM164Q5U3C3 297 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 FBXW9Q5XUX1 488 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 SCCPDHQ8NBX0 429 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 RBMXL1Q96E39 390 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 VSIRQ9H7M9 311 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 SEBOXQ9HB31 216 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 NPIPB11E5RHQ5 1161 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 SYNGR2O43760 224 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 WDR1O75083 606 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 S100A9P06702 114 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 SLC10A1Q14973 349 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF585BQ52M93 769 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF497Q6ZNH5 498 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 RPRMQ9NS64 109 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 GNG13Q9P2W3 67 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 URGCP-MRPS24S4R325 110 aa17.12■□□□□ 0.33
SHKBP1-225ENST00000600733 ZNF883P0CG24 379 aa17.11■□□□□ 0.33
SHKBP1-225ENST00000600733 SELEP16581 610 aa17.11■□□□□ 0.33
SHKBP1-225ENST00000600733 RPS10P46783 165 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-225ENST00000600733 DPPA3Q6W0C5 159 aa17.11■□□□□ 0.33
SHKBP1-225ENST00000600733 RTL8AQ9BWD3 113 aa17.11■□□□□ 0.33
SHKBP1-225ENST00000600733 OR2J1Q9GZK6 312 aa17.11■□□□□ 0.33
SHKBP1-225ENST00000600733 KLF13Q9Y2Y9 288 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-225ENST00000600733 AP4M1O00189 453 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 HBE1P02100 147 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 RAB2AP61019 212 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 ALKBH6Q3KRA9 238 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 MDS2Q8NDY4 140 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 LSM10Q969L4 123 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 NIPSNAP3BQ9BS92 247 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 PSENENQ9NZ42 101 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 CDIPTO14735 213 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 IFNA17P01571 189 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 RNFT1Q5M7Z0 435 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 HAPLN4Q86UW8 402 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 NANOS1Q8WY41 292 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 HIPK2Q9H2X6 1198 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 SPRR3Q9UBC9 169 aa17.1■□□□□ 0.33
SHKBP1-225ENST00000600733 KLRC4-KLRK1H3BQV0 150 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 CLN5O75503 358 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 MDH2P40926 338 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 KHDC3LQ587J8 217 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 NCMAPQ5T1S8 102 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 C1QL4Q86Z23 238 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 Q8WTZ3 238 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 TVP23CQ96ET8 276 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 CHD3Q12873 2000 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 LOC102723971A0A1B0GUV8 181 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 LRP5LA4QPB2 252 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 ZFP92A6NM28 416 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 CXCL1P09341 107 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 WNT2P09544 360 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 HOXB1P14653 301 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 CEACAM6P40199 344 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 ERVFRD-1P60508 538 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 ERVK11-1P61568 191 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 ELOBQ15370 118 aa17.09■□□□□ 0.33
SHKBP1-225ENST00000600733 TBC1D28Q2M2D7 210 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms