RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 AMY2AP04746 511 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 CLEC2LP0C7M8 214 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 CD36P16671 472 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 CEACAM3P40198 252 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 ZNF137PP52743 207 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 ZNF816Q0VGE8 651 aaPredicted RBP12.6□□□□□ -0.39
RPS28-203ENST00000600659 MADCAM1Q13477 382 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 TMEM30BQ3MIR4 351 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 CT45A1Q5HYN5 189 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 PRR18Q8N4B5 295 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 OR10V1Q8NGI7 309 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 CT45A3Q8NHU0 189 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 TOMM40LQ969M1 308 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 RPEQ96AT9 228 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 YIPF6Q96EC8 236 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 OCSTAMPQ9BR26 566 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 CENPOQ9BU64 300 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 PECRQ9BY49 303 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 SERTAD4Q9NUC0 356 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 PLEKHJ1Q9NW61 149 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 RAB22AQ9UL26 194 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 SSR3Q9UNL2 185 aa12.6□□□□□ -0.39
RPS28-203ENST00000600659 MGAM2Q2M2H8 2515 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 NOTOA8MTQ0 251 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 HSD17B6O14756 317 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 SPINT2O43291 252 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 SDC2P34741 201 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 HTD2P86397 168 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 CCDC144NLQ6NUI1 221 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 TSPAN14Q8NG11 270 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 OR52L2PQ8NGH6 319 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 OR4C13Q8NGP0 309 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 OR56B4Q8NH76 319 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 WIPF2Q8TF74 440 aaPredicted RBP12.59□□□□□ -0.39
RPS28-203ENST00000600659 NPFFR1Q9GZQ6 430 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 JPT1Q9UK76 154 aa12.59□□□□□ -0.39
RPS28-203ENST00000600659 PKD1L1Q8TDX9 2849 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 A0A087WXM4 84 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 MFNGO00587 321 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 SMIM18P0DKX4 95 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 RAB6AP20340 208 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 PPP1CCP36873 323 aaKnown RBP12.58□□□□□ -0.4
RPS28-203ENST00000600659 TGFBR1P36897 503 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 RAB7AP51149 207 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 BLCAPP62952 87 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 MORN2Q502X0 79 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 SFXN4Q6P4A7 337 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 TPRA1Q86W33 373 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 ODF3L1Q8IXM7 274 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 DRAM1Q8N682 238 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 OR56B1Q8NGI3 324 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 OR10X1Q8NGY0 326 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 PTX4Q96A99 478 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 KCTD7Q96MP8 289 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 RBM14Q96PK6 669 aaKnown RBP12.58□□□□□ -0.4
RPS28-203ENST00000600659 GNG12Q9UBI6 72 aa12.58□□□□□ -0.4
RPS28-203ENST00000600659 NBEAL1Q6ZS30 2694 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 VWFP04275 2813 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 IGHV1-3A0A0C4DH29 117 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 LOC100506127A0A0U1RQW1 187 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 OR2F2O95006 317 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 SNRNP70P08621 437 aaKnown RBP12.57□□□□□ -0.4
RPS28-203ENST00000600659 BRS3P32247 399 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 REG1BP48304 166 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 LY6G6FQ5SQ64 297 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 Q6ZTK2 550 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 C16orf82Q7Z2V1 217 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 THNSL2Q86YJ6 484 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 RTN4IP1Q8WWV3 396 aaPredicted RBP12.57□□□□□ -0.4
RPS28-203ENST00000600659 RBMXL1Q96E39 390 aaKnown RBP12.57□□□□□ -0.4
RPS28-203ENST00000600659 SLC25A33Q9BSK2 321 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 PARP12Q9H0J9 701 aaKnown RBP12.57□□□□□ -0.4
RPS28-203ENST00000600659 Q9N2K0 584 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 OR2S2Q9NQN1 319 aa12.57□□□□□ -0.4
RPS28-203ENST00000600659 TET2Q6N021 2002 aaPredicted RBP12.57□□□□□ -0.4
RPS28-203ENST00000600659 YPEL1O60688 119 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 MNDAP41218 407 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 HLA-DRB3P79483 266 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 EBI3Q14213 229 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 TMEM95Q3KNT9 176 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 PRR31Q5SQ13 230 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 HIST2H2BDQ6DRA6 164 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 MOB1BQ7L9L4 216 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 OR10R2Q8NGX6 335 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 YPEL2Q96QA6 119 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 RIMS4Q9H426 269 aaPredicted RBP12.56□□□□□ -0.4
RPS28-203ENST00000600659 RAB9BQ9NP90 201 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 C12orf4Q9NQ89 552 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 KCNIP1Q9NZI2 227 aa12.56□□□□□ -0.4
RPS28-203ENST00000600659 IGKV1-6A0A0C4DH72 117 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 SNRPBP14678 240 aaKnown RBP12.55□□□□□ -0.4
RPS28-203ENST00000600659 HIST1H1DP16402 221 aaKnown RBP12.55□□□□□ -0.4
RPS28-203ENST00000600659 GNB3P16520 340 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 RANBP1P43487 201 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 ARHGDIBP52566 201 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 MXD1Q05195 221 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 HERPUD1Q15011 391 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 STEAP3Q658P3 488 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 IZUMO1Q8IYV9 350 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms