RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 C8orf31Q8N9H6 132 aa11.39□□□□□ -0.59
MBD1-220ENST00000589758 OR51D1Q8NGF3 324 aa11.39□□□□□ -0.59
MBD1-220ENST00000589758 RCC1LQ96I51 464 aaKnown RBP11.39□□□□□ -0.59
MBD1-220ENST00000589758 RAB9BQ9NP90 201 aa11.39□□□□□ -0.59
MBD1-220ENST00000589758 STUB1Q9UNE7 303 aa11.39□□□□□ -0.59
MBD1-220ENST00000589758 SHISA3A0PJX4 238 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 MCRIP1C9JLW8 97 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 SDCBPO00560 298 aaPredicted RBP11.38□□□□□ -0.59
MBD1-220ENST00000589758 IGKV1D-33P01593 117 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 IGKV1-33P01594 117 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 MT-ND4P03905 459 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 UBBP0CG47 229 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 CLDN12P56749 244 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 OR10A3P58181 314 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 EBI3Q14213 229 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 HNF4GQ14541 408 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 RAB11BQ15907 218 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 TMEM30BQ3MIR4 351 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 Q3ZCU0 254 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 HES5Q5TA89 166 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 C10orf99Q6UWK7 81 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 ZNF497Q6ZNH5 498 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 LINC00311Q8N616 119 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 OR6M1Q8NGM8 313 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 CHCHD6Q9BRQ6 235 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 CST11Q9H112 138 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 OR51E2Q9H255 320 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 VCX3AQ9NNX9 186 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 TXNL4BQ9NX01 149 aaKnown RBP11.38□□□□□ -0.59
MBD1-220ENST00000589758 GHRLQ9UBU3 117 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 SSR3Q9UNL2 185 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 V9GY05 133 aa11.38□□□□□ -0.59
MBD1-220ENST00000589758 IGHV1-3A0A0C4DH29 117 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 LOC100506127A0A0U1RQW1 187 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 A0A1W2PPE3 182 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 SERPINE3A8MV23 424 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 AIPO00170 330 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 SLC17A2O00624 439 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 PDCD5O14737 125 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 SLC22A1O15245 554 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 IGHG2P01859 326 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 CD36P16671 472 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 GADD45AP24522 165 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 IL3RAP26951 378 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 SLC6A1P30531 599 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 SLC35B1P78383 322 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 RAB12Q6IQ22 244 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 SLC35E3Q7Z769 313 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 MOB3BQ86TA1 216 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 FOXRED2Q8IWF2 684 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 COMMD1Q8N668 190 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 CCDC107Q8WV48 283 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 Q96M66 194 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 GPR61Q9BZJ8 451 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 ZFP57Q9NU63 452 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 GFOD1Q9NXC2 390 aa11.37□□□□□ -0.59
MBD1-220ENST00000589758 TRAV1-2A0A0B4J238 106 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 SPINT2O43291 252 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 CA11O75493 328 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 BPNT1O95861 308 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 CD37P11049 281 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 ARSBP15848 533 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 RAB3BP20337 219 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 GALP22466 123 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 UNC119Q13432 240 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 NKAPLQ5M9Q1 402 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 C6orf183Q5T699 404 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 TRAT1Q6PIZ9 186 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 ZNF329Q86UD4 541 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 TGIF2LXQ8IUE1 241 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 IZUMO1Q8IYV9 350 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 OR2T10Q8NGZ9 312 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 KCNG3Q8TAE7 436 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 CYYR1Q96J86 154 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 EAF1Q96JC9 268 aaPredicted RBP11.36□□□□□ -0.59
MBD1-220ENST00000589758 TMEM59Q9BXS4 323 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 GON7Q9BXV9 100 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 RCC2Q9P258 522 aaKnown RBP11.36□□□□□ -0.59
MBD1-220ENST00000589758 TRAPPC2LQ9UL33 140 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 PEX16Q9Y5Y5 336 aa11.36□□□□□ -0.59
MBD1-220ENST00000589758 NOTCH3Q9UM47 2321 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 UBE2QL1A1L167 161 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 FAM90A10PA6NDY2 464 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 FAM90A7PA6NKC0 464 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 NCBP2LA6PVI3 153 aaKnown RBP11.35□□□□□ -0.59
MBD1-220ENST00000589758 FAM90A23PA8MXZ1 464 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 TXNL1O43396 289 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 GLAP06280 429 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 CD1BP29016 333 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 FGF9P31371 208 aaPredicted RBP11.35□□□□□ -0.59
MBD1-220ENST00000589758 REG1BP48304 166 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 PSMD7P51665 324 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 RPL23AP62750 156 aaKnown RBP11.35□□□□□ -0.59
MBD1-220ENST00000589758 RPS27AP62979 156 aaKnown RBP11.35□□□□□ -0.59
MBD1-220ENST00000589758 SIGIRRQ6IA17 410 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 GAPTQ8N292 157 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 LINC00482Q8N8I6 264 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 ST6GALNAC6Q969X2 333 aa11.35□□□□□ -0.59
MBD1-220ENST00000589758 FAM3DQ96BQ1 224 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms