RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 LOC100130705A0A1B0GUX0 176 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 FAM90A7PA6NKC0 464 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 FAM90A23PA8MXZ1 464 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 OVOL1O14753 267 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 OGG1O15527 345 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 SC5DO75845 299 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 LY86O95711 162 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 HBZP02008 142 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 IGFBP3P17936 291 aaPredicted RBP10.86□□□□□ -0.67
VMP1-209ENST00000588915 DCKP27707 260 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 RIPK1Q13546 671 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 MORN2Q502X0 79 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 LY6G6FQ5SQ64 297 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 ASPHD1Q5U4P2 390 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 FAM53AQ6NSI3 398 aaPredicted RBP10.86□□□□□ -0.67
VMP1-209ENST00000588915 TMPRSS11AQ6ZMR5 421 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 SBSPONQ8IVN8 264 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 CBR4Q8N4T8 237 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 MINDY2Q8NBR6 621 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 PYDC1Q8WXC3 89 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 ZNF184Q99676 751 aaPredicted RBP10.86□□□□□ -0.67
VMP1-209ENST00000588915 ETAA1Q9NY74 926 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 ERGIC3Q9Y282 383 aa10.86□□□□□ -0.67
VMP1-209ENST00000588915 TRAV41A0A0B4J266 112 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 ACTBP60709 375 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 HTD2P86397 168 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 XAF1Q6GPH4 301 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 LIN54Q6MZP7 749 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 NPBQ8NG41 125 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 OR4K15Q8NH41 348 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 DCUN1D4Q92564 292 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 SMIM19Q96E16 107 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 ZNF251Q9BRH9 671 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 C9orf16Q9BUW7 83 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 GHITMQ9H3K2 345 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 ZMAT4Q9H898 229 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 OR2S2Q9NQN1 319 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 MBNL3Q9NUK0 354 aaKnown RBP10.85□□□□□ -0.67
VMP1-209ENST00000588915 BABAM2Q9NXR7 383 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 CKLFQ9UBR5 152 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 JPT1Q9UK76 154 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 MRPS28Q9Y2Q9 187 aaKnown RBP10.85□□□□□ -0.67
VMP1-209ENST00000588915 LRRC42Q9Y546 428 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 WSB1Q9Y6I7 421 aa10.85□□□□□ -0.67
VMP1-209ENST00000588915 IGHV7-81A0A0B4J1V7 117 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 TRBV5-5A0A0J9YX44 114 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 A0A1W2PP11 408 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 G3V318 75 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 H3BNX3 289 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 ARPC1BO15143 372 aaKnown RBP10.84□□□□□ -0.67
VMP1-209ENST00000588915 ATP6V0E1O15342 81 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 NBR2O15453 112 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 YPEL1O60688 119 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 SLC2A2P11168 524 aaPredicted RBP10.84□□□□□ -0.67
VMP1-209ENST00000588915 RCC1P18754 421 aaPredicted RBP10.84□□□□□ -0.67
VMP1-209ENST00000588915 FUT3P21217 361 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 MYF6P23409 242 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 CRIP2P52943 208 aaPredicted RBP10.84□□□□□ -0.67
VMP1-209ENST00000588915 GNB1P62873 340 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 C5orf64Q2M2E5 130 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 Q499Y3 187 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 RAB12Q6IQ22 244 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 C10orf67Q8IYJ2 551 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 TCTEX1D1Q8N7M0 179 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 OR10V1Q8NGI7 309 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 OR6Q1Q8NGQ2 317 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 OR1L1Q8NH94 360 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 RDH12Q96NR8 316 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 YPEL2Q96QA6 119 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 NABP2Q9BQ15 211 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 ABHD14AQ9BUJ0 271 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 CST11Q9H112 138 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 TAF9BQ9HBM6 251 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 ISYNA1Q9NPH2 558 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 KCNIP1Q9NZI2 227 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 PEX16Q9Y5Y5 336 aa10.84□□□□□ -0.67
VMP1-209ENST00000588915 IRGMA1A4Y4 181 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 LINC01619G3V211 115 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 RGS11O94810 467 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 NDUFA3O95167 84 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 LYL1P12980 280 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 FSTP19883 344 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 ETV1P50549 477 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 TMEM267Q0VDI3 215 aaPredicted RBP10.83□□□□□ -0.68
VMP1-209ENST00000588915 YIF1BQ5BJH7 314 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 ZNF660Q6AZW8 331 aaPredicted RBP10.83□□□□□ -0.68
VMP1-209ENST00000588915 GLIPR1L1Q6UWM5 242 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 ZNF833PQ6ZTB9 187 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 ODF3L1Q8IXM7 274 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 PRR18Q8N4B5 295 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 APH1BQ8WW43 257 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 GHSRQ92847 366 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 CITED4Q96RK1 184 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 ANKRD60Q9BZ19 345 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 TOLLIPQ9H0E2 274 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 PARP11Q9NR21 331 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 TPSG1Q9NRR2 321 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 FAM53CQ9NYF3 392 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 KIAA1456Q9P272 454 aa10.83□□□□□ -0.68
VMP1-209ENST00000588915 TENM2Q9NT68 2774 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms