RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 HBZP02008 142 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 EGR2P11161 476 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-225ENST00000586385 FCGR1AP12314 374 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 RCC1P18754 421 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-225ENST00000586385 SERPINA2P20848 420 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 GABPB1Q06547 395 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-225ENST00000586385 MPV17LQ2QL34 196 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 ZIK1Q3SY52 487 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-225ENST00000586385 ATAD3CQ5T2N8 411 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 SYT6Q5T7P8 510 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-225ENST00000586385 MEDAGQ5VYS4 303 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 TMEM65Q6PI78 240 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 OR4K15Q8NH41 348 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 METTL9Q9H1A3 318 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 PALMDQ9NP74 551 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 PARP11Q9NR21 331 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 C19orf73Q9NVV2 129 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 HYDINQ4G0P3 5121 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 EI24O14681 340 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 LIMS3P0CW19 117 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 LIMS4P0CW20 117 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 IGHV4-30-4P0DP06 118 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 ZNF93P35789 620 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-225ENST00000586385 CRIP2P52943 208 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-225ENST00000586385 C5orf64Q2M2E5 130 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 SLC22A6Q4U2R8 563 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 DDI2Q5TDH0 399 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 LINC00596Q86U02 117 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 OR52I1Q8NGK6 324 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 OR13C5Q8NGS8 318 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 CPNE2Q96FN4 548 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-225ENST00000586385 NABP2Q9BQ15 211 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 TMEM138Q9NPI0 162 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 GNG12Q9UBI6 72 aa9.14□□□□□ -0.95
BRCA1-225ENST00000586385 LINC01619G3V211 115 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 NBR2O15453 112 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 MAGEB3O15480 346 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 SPINT2O43291 252 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 NDUFA3O95167 84 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 RPSAP08865 295 aaKnown RBP9.13□□□□□ -0.95
BRCA1-225ENST00000586385 LGALS1P09382 135 aaKnown RBP9.13□□□□□ -0.95
BRCA1-225ENST00000586385 IGFBP3P17936 291 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-225ENST00000586385 GBX2P52951 348 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-225ENST00000586385 SRSF7Q16629 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
BRCA1-225ENST00000586385 MORN2Q502X0 79 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 STEAP3Q658P3 488 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 SIGIRRQ6IA17 410 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 PRR18Q8N4B5 295 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 NPBQ8NG41 125 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 OR52L2PQ8NGH6 319 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 RHOXF1Q8NHV9 184 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 GPR148Q8TDV2 347 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 NEK7Q8TDX7 302 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 TMEM106AQ96A25 262 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 ZMAT4Q9H898 229 aa9.13□□□□□ -0.95
BRCA1-225ENST00000586385 MRPS18AQ9NVS2 196 aaKnown RBP9.13□□□□□ -0.95
BRCA1-225ENST00000586385 TRAV8-7A0A075B6U6 113 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 A0A1W2PN81 502 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 A8MZ25 164 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 FCN1O00602 326 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 DYNC1I1O14576 645 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 SC5DO75845 299 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 CSTBP04080 98 aaKnown RBP9.12□□□□□ -0.95
BRCA1-225ENST00000586385 GTF2F2P13984 249 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 BDKRB2P30411 391 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 CHRNA7P36544 502 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 PPP1CCP36873 323 aaKnown RBP9.12□□□□□ -0.95
BRCA1-225ENST00000586385 OR3A3P47888 321 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 VEGFCP49767 419 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 MRPL28Q13084 256 aaKnown RBP9.12□□□□□ -0.95
BRCA1-225ENST00000586385 ECSCRQ19T08 205 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 LRRC36Q1X8D7 754 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 TMEM30BQ3MIR4 351 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 C1orf146Q5VVC0 180 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 RAB12Q6IQ22 244 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 LIN54Q6MZP7 749 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 ZNF833PQ6ZTB9 187 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 OR6Q1Q8NGQ2 317 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 APH1BQ8WW43 257 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 MRPL48Q96GC5 212 aaKnown RBP9.12□□□□□ -0.95
BRCA1-225ENST00000586385 ZNF184Q99676 751 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-225ENST00000586385 TAF9BQ9HBM6 251 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 MBNL3Q9NUK0 354 aaKnown RBP9.12□□□□□ -0.95
BRCA1-225ENST00000586385 ETAA1Q9NY74 926 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 TRAPPC2LQ9UL33 140 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 GAB2Q9UQC2 676 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 NUBP2Q9Y5Y2 271 aa9.12□□□□□ -0.95
BRCA1-225ENST00000586385 TRBV5-5A0A0J9YX44 114 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 H3BNX3 289 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 LDLRAD4O15165 306 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 FADS2O95864 444 aaKnown RBP9.11□□□□□ -0.95
BRCA1-225ENST00000586385 LALBAP00709 142 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 IGLV1-51P01701 117 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 IGHV3-11P01762 117 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 RPS11P62280 158 aaKnown RBP eCLIP9.11□□□□□ -0.95
BRCA1-225ENST00000586385 CX3CL1P78423 397 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 RAB40BQ12829 278 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 DOC2BQ14184 412 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 C6orf183Q5T699 404 aa9.11□□□□□ -0.95
BRCA1-225ENST00000586385 LYPD6Q86Y78 171 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms