RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 CD2P06729 351 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 FRMD6-AS1P0C7T7 363 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 GTF2F2P13984 249 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 SPNP16150 400 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 IGFBP3P17936 291 aaPredicted RBP10.42□□□□□ -0.74
CCDC57-218ENST00000583593 RCC1P18754 421 aaPredicted RBP10.42□□□□□ -0.74
CCDC57-218ENST00000583593 BDKRB2P30411 391 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 RAB9AP51151 201 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 MMDQ15546 238 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 SLC22A6Q4U2R8 563 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 RPL22L1Q6P5R6 122 aaKnown RBP10.42□□□□□ -0.74
CCDC57-218ENST00000583593 TMEM65Q6PI78 240 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 PRR18Q8N4B5 295 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 OR13C5Q8NGS8 318 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 APH1BQ8WW43 257 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 DLX4Q92988 240 aaPredicted RBP10.42□□□□□ -0.74
CCDC57-218ENST00000583593 OR51J1Q9H342 316 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 ISYNA1Q9NPH2 558 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 TPSG1Q9NRR2 321 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 GNG12Q9UBI6 72 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 TRAPPC2LQ9UL33 140 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 ORC6Q9Y5N6 252 aa10.42□□□□□ -0.74
CCDC57-218ENST00000583593 SPINT2O43291 252 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 SOX15O60248 233 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 ZNF780AO75290 641 aaPredicted RBP10.41□□□□□ -0.74
CCDC57-218ENST00000583593 SLURP1P55000 103 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 ACTBP60709 375 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 GNMTQ14749 295 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 CCDC58Q4VC31 144 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 MORN2Q502X0 79 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 C19orf54Q5BKX5 351 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 FAM27D1Q5T7N8 215 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 OR2G6Q5TZ20 316 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 STEAP3Q658P3 488 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 CBR4Q8N4T8 237 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 MINDY2Q8NBR6 621 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 S100A13Q99584 98 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 ZNF184Q99676 751 aaPredicted RBP10.41□□□□□ -0.74
CCDC57-218ENST00000583593 NABP2Q9BQ15 211 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 ANKRD60Q9BZ19 345 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 FGF20Q9NP95 211 aaPredicted RBP10.41□□□□□ -0.74
CCDC57-218ENST00000583593 PAK1IP1Q9NWT1 392 aaPredicted RBP10.41□□□□□ -0.74
CCDC57-218ENST00000583593 FBXO7Q9Y3I1 522 aa10.41□□□□□ -0.74
CCDC57-218ENST00000583593 TRAV41A0A0B4J266 112 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 LCE6AA0A183 80 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 TRIM64CA6NLI5 447 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 MCRIP1C9JLW8 97 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 OGG1O15527 345 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 GPX5O75715 221 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 SC5DO75845 299 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 LALBAP00709 142 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 LYL1P12980 280 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 GP9P14770 177 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 BLVRBP30043 206 aaPredicted RBP10.4□□□□□ -0.74
CCDC57-218ENST00000583593 ETV1P50549 477 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 RASSF2P50749 326 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 PPP3R1P63098 170 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 NDPQ00604 133 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 TMEM30BQ3MIR4 351 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 C6orf183Q5T699 404 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 STX19Q8N4C7 294 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 OR52L2PQ8NGH6 319 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 Q96MT0 163 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 MRPL20Q9BYC9 149 aaKnown RBP10.4□□□□□ -0.74
CCDC57-218ENST00000583593 TAF9BQ9HBM6 251 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 PARP11Q9NR21 331 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 MBNL3Q9NUK0 354 aaKnown RBP10.4□□□□□ -0.74
CCDC57-218ENST00000583593 ETAA1Q9NY74 926 aa10.4□□□□□ -0.74
CCDC57-218ENST00000583593 RPL36Q9Y3U8 105 aaKnown RBP10.4□□□□□ -0.74
CCDC57-218ENST00000583593 HYDINQ4G0P3 5121 aa10.4□□□□□ -0.75
CCDC57-218ENST00000583593 TRAV8-7A0A075B6U6 113 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 IGHV4OR15-8A0A075B7B6 117 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 A0A087WW49 117 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 TRBV5-5A0A0J9YX44 114 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 NBR2O15453 112 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 SAP30O75446 220 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 RPS11P62280 158 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC57-218ENST00000583593 RIPK1Q13546 671 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 SMN1Q16637 294 aaKnown RBP10.39□□□□□ -0.75
CCDC57-218ENST00000583593 C5orf64Q2M2E5 130 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 SIGIRRQ6IA17 410 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 RAB12Q6IQ22 244 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 ACSM6Q6P461 480 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 NPBQ8NG41 125 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 CASTOR1Q8WTX7 329 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 SLC29A1Q99808 456 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 TOLLIPQ9H0E2 274 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 SPACA1Q9HBV2 294 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 OR2S2Q9NQN1 319 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 FAM53CQ9NYF3 392 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 PEX16Q9Y5Y5 336 aa10.39□□□□□ -0.75
CCDC57-218ENST00000583593 PLECQ15149 4684 aaKnown RBP10.38□□□□□ -0.75
CCDC57-218ENST00000583593 LOC100130705A0A1B0GUX0 176 aa10.38□□□□□ -0.75
CCDC57-218ENST00000583593 LINC01619G3V211 115 aa10.38□□□□□ -0.75
CCDC57-218ENST00000583593 WBP4O75554 376 aaKnown RBP10.38□□□□□ -0.75
CCDC57-218ENST00000583593 ATP5HO75947 161 aa10.38□□□□□ -0.75
CCDC57-218ENST00000583593 NDUFA3O95167 84 aa10.38□□□□□ -0.75
CCDC57-218ENST00000583593 EGR2P11161 476 aaPredicted RBP10.38□□□□□ -0.75
CCDC57-218ENST00000583593 PPP1CCP36873 323 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms