RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 HTR2CP28335 458 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 LUMP51884 338 aaPredicted RBP10.68□□□□□ -0.7
SS18-222ENST00000582792 KRBOX4Q5JUW0 171 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 AWAT2Q6E213 333 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 RAX2Q96IS3 184 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 KIRREL1Q96J84 757 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 PRR25Q96S07 402 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 GFI1Q99684 422 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 LINC00527Q9UJ94 153 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 TENM2Q9NT68 2774 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 KBTBD11-OT1A0A1B0GTJ5 212 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 A0A1W2PPI3 338 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 SHISA3A0PJX4 238 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 CDRT1O95170 752 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 HTR3BO95264 441 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 BPNT1O95861 308 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 GTF2F2P13984 249 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 ZNF44P15621 663 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 TMEM11P17152 192 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 RAB3BP20337 219 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 RAB25P57735 213 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 HES1Q14469 280 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 MPV17LQ2QL34 196 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 Q6P435 159 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 SLC35E3Q7Z769 313 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 FOXRED2Q8IWF2 684 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 STPG2Q8N412 459 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 DRAM1Q8N682 238 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 CHCHD6Q9BRQ6 235 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 CST11Q9H112 138 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 ING3Q9NXR8 418 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 OR6C3Q9NZP0 311 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 AK6Q9Y3D8 172 aaKnown RBP10.67□□□□□ -0.7
SS18-222ENST00000582792 DNAH7Q8WXX0 4024 aa10.67□□□□□ -0.7
SS18-222ENST00000582792 SACSQ9NZJ4 4579 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 NOTOA8MTQ0 251 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 J3QR06 171 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 SLC33A1O00400 549 aaPredicted RBP10.66□□□□□ -0.7
SS18-222ENST00000582792 AIREO43918 545 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 CGB3P0DN86 165 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 CGB7P0DN87 165 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 RPL5P46777 297 aaKnown RBP10.66□□□□□ -0.7
SS18-222ENST00000582792 KCNJ3P48549 501 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 RBM11P57052 281 aaKnown RBP10.66□□□□□ -0.7
SS18-222ENST00000582792 SCN1BQ07699 218 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 MADCAM1Q13477 382 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 HNF4GQ14541 408 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 ATXN7L3Q14CW9 347 aaPredicted RBP10.66□□□□□ -0.7
SS18-222ENST00000582792 RAB11BQ15907 218 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 SLC22A6Q4U2R8 563 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 C9orf66Q5T8R8 295 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 TEX38Q6PEX7 206 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 ANKRD13BQ86YJ7 626 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 OR8H3Q8N146 312 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 OR5M8Q8NGP6 311 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 OR10K1Q8NGX5 313 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 KCNG3Q8TAE7 436 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 ASCL2Q99929 193 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 FUNDC2Q9BWH2 189 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 PLGRKTQ9HBL7 147 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 STEAP1Q9UHE8 339 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 ST3GAL6Q9Y274 331 aa10.66□□□□□ -0.7
SS18-222ENST00000582792 HUWE1Q7Z6Z7 4374 aaKnown RBP10.65□□□□□ -0.7
SS18-222ENST00000582792 LOC100506127A0A0U1RQW1 187 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 IFITM5A6NNB3 132 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 TMEM14DPA8MWL7 114 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 AIPO00170 330 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 DEGS1O15121 323 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 IGKV1D-33P01593 117 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 IGKV1-33P01594 117 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 IGHV3-7P01780 117 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 GLAP06280 429 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 SERPINA2P20848 420 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 RAB7AP51149 207 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 QRFPP83859 136 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 PAX5Q02548 391 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 DIAPH2-AS1Q14236 149 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 GPR141Q7Z602 305 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 OR8U1Q8NH10 309 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 LEAP2Q969E1 77 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 Q96M66 194 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 CENPOQ9BU64 300 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 NCOR1P1Q9H4R4 102 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 LINC00574Q9H8X3 128 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 SPACA1Q9HBV2 294 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 CALYQ9NYX4 217 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 SCOCQ9UIL1 159 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 PSG11Q9UQ72 335 aa10.65□□□□□ -0.7
SS18-222ENST00000582792 LINC01548A6NM66 108 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 AP4M1O00189 453 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 RPLP1P05386 114 aaKnown RBP10.64□□□□□ -0.71
SS18-222ENST00000582792 ARSBP15848 533 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 MGMTP16455 207 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 CHATP28329 748 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 SDC2P34741 201 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 ECI1P42126 302 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 GLP1RP43220 463 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 EBI3Q14213 229 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 KIR2DS1Q14954 304 aa10.64□□□□□ -0.71
SS18-222ENST00000582792 PNLIPRP3Q17RR3 467 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms